ExperimentSetReplicate

ExperimentSet4DNESF3NLDVC
released
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RNA-seq on microdissected cerebellar lobule IX from mixed strain mouse postnatal day 56

   March 26th, 2022 at 10:33pm
Source Publication
Mega-Enhancer Bodies Organize Neuronal Long Genes in the Cerebellum.
Zhao Z, Parra OP, et al., bioRxiv : the preprint server for biology 2023

Experiment Set Properties  

Set Type 
Replicate
Organism 
M. musculus
Sample Type 
tissue
Sample 
cerebellum vermis lobule IX
Experiment Type(s) 
RNA-seq
Modification Type 
None
Treatment Type 
None
Assay Details 
None

20 Processed Files

Quality Metrics

Experiment
For File
Total mapped reads (genome)
Total uniquely mapped reads (genome)
Details
Experiment
4DNEXB6PDECI
Bio Rep 1, Tec Rep 1
RNA-seq on cerebellum vermis lobule IX
File
Read Positions (bam)
4DNFIITGABND
21.67m
20.5m
Experiment
4DNEXS7GXLDU
Bio Rep 2, Tec Rep 1
RNA-seq on cerebellum vermis lobule IX
File
Read Positions (bam)
4DNFI2KOKGKR
22.08m
21m
Experiment
4DNEXGLQPNYP
Bio Rep 3, Tec Rep 1
RNA-seq on cerebellum vermis lobule IX
File
Read Positions (bam)
4DNFI8P373NF
19.95m
18.83m
Experiment
4DNEXC4USBOZ
Bio Rep 4, Tec Rep 1
RNA-seq on cerebellum vermis lobule IX
File
Read Positions (bam)
4DNFI6UCKFC6
19.43m
18.37m
Experiment
For File
Reads mapped to protein-coding genes
Reads mapped to rRNA
Details
Experiment
4DNEXB6PDECI
Bio Rep 1, Tec Rep 1
RNA-seq on cerebellum vermis lobule IX
File
Gene Expression (tsv)
4DNFIDY7GITU
13.21m
43.43k
Experiment
4DNEXS7GXLDU
Bio Rep 2, Tec Rep 1
RNA-seq on cerebellum vermis lobule IX
File
Gene Expression (tsv)
4DNFIT44YVOH
12.94m
18.11k
Experiment
4DNEXGLQPNYP
Bio Rep 3, Tec Rep 1
RNA-seq on cerebellum vermis lobule IX
File
Gene Expression (tsv)
4DNFITU6TNP4
12.13m
72.13k
Experiment
4DNEXC4USBOZ
Bio Rep 4, Tec Rep 1
RNA-seq on cerebellum vermis lobule IX
File
Gene Expression (tsv)
4DNFI8N18YN2
11.84m
26.54k