ExperimentSetReplicate

ExperimentSet4DNESEX887FC
released
View JSON

4C-seq on Trophoblast stem cells (TSC) from mouse - Gata4

   December 4th, 2023 at 7:07pm
Source Publication
Systematic mapping and modeling of 3D enhancer-promoter interactions in early mouse embryonic lineages reveal regulatory principles that determine the levels and cell-type specificity of gene expression.
Murphy D, Salataj E, et al., bioRxiv : the preprint server for biology 2023

Experiment Set Properties  

Set Type 
Replicate
Organism 
M. musculus
Sample Type 
stem cells
Sample 
trophoblast cell
Experiment Type(s) 
4C-seq
Modification Type 
None
Treatment Type 
None
Assay Details 
Target: Gata4 mouse gene

3 Raw Files

Biosample
Experiment
File
File Size
Sequence Length
Overall Quality
Total Sequences
Biosample
4DNBSH4VFWP9
Bio Replicate 1
Experiment
4DNEXIAFBVIX
Tech Replicate 1
File
File
4DNFI1R2XHRN
81.37 MB
101
  Pass
3.55m
Biosample
4DNBSRJ6OI4Y
Bio Replicate 2
Experiment
4DNEXD9BVKN2
Tech Replicate 1
File
File
4DNFIMHMJO8M
104.49 MB
101
  Pass
4.34m
Biosample
4DNBS5Y6JN5B
Bio Replicate 3
Experiment
4DNEXZVZZFDK
Tech Replicate 1
File
File
4DNFIZJDEMJ9
115.12 MB
101
  Pass
4.76m