ExperimentSetReplicate

ExperimentSet4DNESDZ7WWMQ
released
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ChIP-seq in GM12878 using antibody NIPBL

   June 28th, 2024 at 5:23pm
Source Publication
Multifaceted roles of cohesin in regulating transcriptional loops.
Kim M, Wang P, et al., bioRxiv : the preprint server for biology 2024

Experiment Set Properties  

Set Type 
Replicate
Organism 
H. sapiens
Sample Type 
immortalized cells
Sample 
GM12878
Experiment Type(s) 
ChIP-seq
Modification Type 
None
Treatment Type 
None
Assay Details 
Target: NIPBL

4 Processed Files

Quality Metrics

Experiment
For File
PCR Bottleneck Coefficient (PBC)
Nonredundant Read Fraction (NRF)
Filtered & Deduped Reads
Report
Details
Experiment
4DNEX5XC4O45
Bio Rep 1, Tec Rep 1
ChIP-seq against NIPBL on GM12878
File
Read Positions (bed)
4DNFI5M5GJZV
0.8
0.81
39.8m