ExperimentSetReplicate

ExperimentSet4DNESD1GM935
released

Replicate Set of sciHi-C on F121-6 mESC cells Timecourse #1 - day 20 of embryoid body differentiation - this Replicate Set is derived from experiments performed on pooled mixtures of F121-6 cells undergoing differentiation to embryoid bodies. Cells are harvested on specific days over the time course of differentiation. The raw files linked to the experiments in this set will contain reads from multiple time points and barcode information needs to used to obtain cell specific reads - see details in the experiment descriptions. Processed files for this set will be specific to day 20 of differentiation.

   November 7th, 2020 at 2:30am

Assay Description  



Experiment Set Properties  


Set Type 
Replicate
Organism 
Biosource Type 
stem cell
Biosource 
F121-6-CASTx129 differentiated to embryoid body
Experiment Type(s) 
Modification Type 
None
Treatment Type 
None
Assay Details 
Enzyme: DpnII

4 Raw Files

Biosample
Experiment
File
File Size
Sequence Length
Overall Quality
Total Sequences
Notes
Biosample
4DNBSOI4C2WF
Bio Replicate 1
Experiment
4DNEXTJOSWTW
Tech Replicate 1
Pair 1
3.69 GB
250
  Pass
18.95m
3.86 GB
250
  Pass
18.95m
Pair 2
14.53 GB
250
  Pass
94.27m
14.92 GB
250
  Pass
94.27m