ExperimentSetReplicate

ExperimentSet4DNESBOTN18D
released
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SLAM-seq on G1 stage 60 min DMSO treated dTAG-NIPBL clone D7 - 15 min 4sU labeling

   October 18th, 2024 at 2:36pm
Source Publication
Genome-wide in vivo dynamics of cohesin-mediated loop extrusion and its role in transcription activation
Popay TM, Pant A, et al., bioRxiv 2024

Experiment Set Properties  

Set Type 
Replicate
Organism 
H. sapiens
Sample Type 
immortalized cells
Sample 
dTAG-NIPBL hTERT-RPE-1 - clone D7
Experiment Type(s) 
SLAM-seq
Modification Type 
None
Treatment Type 
Chemical
Assay Details 
None

6 Raw Files

Biosample
Experiment
File
File Size
Sequence Length
Overall Quality
Total Sequences
Biosample
4DNBSY35EPVH
Bio Replicate 1
Experiment
4DNEXVEW6XG8
Tech Replicate 1
Pair
File
4DNFIXHFJ7Z6
6.73 GB
101
  Pass
135.45m
File
4DNFIUGJH8CU
6.82 GB
101
  Pass
135.45m
Biosample
4DNBS6O4X4H6
Bio Replicate 2
Experiment
4DNEXTWJVD5T
Tech Replicate 1
Pair
File
4DNFI9US5DDZ
12.42 GB
101
  Pass
252.31m
File
4DNFIUODTW3C
12.56 GB
101
  Pass
252.31m
Biosample
4DNBS8NC29MV
Bio Replicate 3
Experiment
4DNEXUGCVZU1
Tech Replicate 1
Pair
File
4DNFI2MTO1S4
6.51 GB
101
  Pass
130.69m
File
4DNFILFRJ1D3
6.61 GB
101
  Pass
130.69m