ExperimentSet4DNESBKGA5V9
released
October 17th, 2024 at 9:16pm
Source Publication
Genome-wide in vivo dynamics of cohesin-mediated loop extrusion and its role in transcription activation
Popay TM, Pant A, et al., bioRxiv 2024
Assay Description
Experiment Set Properties
Set Type
Replicate
Organism
Sample Type
immortalized cells
Experiment Type(s)
Modification Type
None
Treatment Type
Chemical
Assay Details
Enzyme: Arima - A1, A2
7 Processed Files
Experiment
File
File Type
File Size
Experiment
4DNEXZHKCFNB
Bio Rep 1, Tec Rep 1
in situ Hi-C on dTAG-NIPBL hTERT-RPE-1 - clone D7 with Arima - A1, A2Experiment
4DNEXIZ1FF27
Bio Rep 2, Tec Rep 1
in situ Hi-C on dTAG-NIPBL hTERT-RPE-1 - clone D7 with Arima - A1, A2Quality Metrics
Experiment
For File
Filtered Reads
Cis reads (>20kb)
Short cis reads
Trans Reads
Report
Details
Experiment
4DNEXZHKCFNB
Bio Rep 1, Tec Rep 1
in situ Hi-C on dTAG-NIPBL hTERT-RPE-1 - clone D7 with Arima - A1, A2Experiment
4DNEXIZ1FF27
Bio Rep 2, Tec Rep 1
in situ Hi-C on dTAG-NIPBL hTERT-RPE-1 - clone D7 with Arima - A1, A2Experiment
For File
Failed Balancing
Details