ExperimentSetReplicate

ExperimentSet4DNES9QTHSCG
released
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Cas9 ChIPseq on HEK293 cells - time 3h after Cas9-AluTA mgRNA delivery

   February 14th, 2022 at 3:03am
Source Publication
Massively parallel genomic perturbations with multi-target CRISPR interrogates Cas9 activity and DNA repair at endogenous sites.
Zou RS, Marin-Gonzalez A, et al., Nature cell biology 2022

Experiment Set Properties  

Set Type 
Replicate
Organism 
H. sapiens
Sample Type 
immortalized cells
Sample 
HEK293 (Tier 2)
Experiment Type(s) 
ChIP-seq
Modification Type 
None
Treatment Type 
Transient Transfection
Assay Details 
Target: cas9 engineered reagent protein

4 Processed Files

Quality Metrics

Experiment
For File
PCR Bottleneck Coefficient (PBC)
Nonredundant Read Fraction (NRF)
Filtered & Deduped Reads
Report
Details
Experiment
4DNEXZWJGGDZ
Bio Rep 1, Tec Rep 1
ChIP-seq against cas9 engineered reagent protein on HEK293 (Tier 2)
File
Read Positions (bed)
4DNFIQV7I2U1
0.41
0.45
6.5m