ExperimentSetReplicate

ExperimentSet4DNES9ON1KNS
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RNA-seq on cerebellar granule neurons with ubash3b enhancer sgRNA isolated using FANS at day 14 after in vivo electroporation from dCas9-KRAB mouse postnatal day 20

   August 5th, 2025 at 7:34pm

Experiment Set Properties  

Set Type 
Replicate
Organism 
M. musculus
Sample Type 
primary cells
Sample 
cerebellar granule neuron - 14 days old
Experiment Type(s) 
RNA-seq
Modification Type 
Crispr
Treatment Type 
None
Assay Details 
None

30 Processed Files

Quality Metrics

Experiment
For File
Total mapped reads (genome)
Total uniquely mapped reads (genome)
Details
Experiment
4DNEXCW54TRA
Bio Rep 1, Tec Rep 1
RNA-seq on cerebellar granule neuron - 14 days old
File
Read Positions (bam)
4DNFIOJ3L297
36.53m
35.82m
Experiment
4DNEXF9ILXVI
Bio Rep 2, Tec Rep 1
RNA-seq on cerebellar granule neuron - 14 days old
File
Read Positions (bam)
4DNFIEH3R5OR
38.38m
37.66m
Experiment
4DNEXKTXFU3S
Bio Rep 3, Tec Rep 1
RNA-seq on cerebellar granule neuron - 14 days old
File
Read Positions (bam)
4DNFI2259S9F
26.59m
25.98m
Experiment
4DNEXPPHED93
Bio Rep 4, Tec Rep 1
RNA-seq on cerebellar granule neuron - 14 days old
File
Read Positions (bam)
4DNFIFROOMFS
37.14m
36.33m
Experiment
4DNEX4XN35NE
Bio Rep 5, Tec Rep 1
RNA-seq on cerebellar granule neuron - 14 days old
File
Read Positions (bam)
4DNFISCIX6P1
33.96m
33.18m
Experiment
4DNEXJPWNQRM
Bio Rep 6, Tec Rep 1
RNA-seq on cerebellar granule neuron - 14 days old
File
Read Positions (bam)
4DNFI2XLJKDV
29.6m
28.89m
Experiment
For File
Reads mapped to protein-coding genes
Reads mapped to rRNA
Details
Experiment
4DNEXCW54TRA
Bio Rep 1, Tec Rep 1
RNA-seq on cerebellar granule neuron - 14 days old
File
Gene Expression (tsv)
4DNFIL6OCL22
11.13m
58.27k
Experiment
4DNEXF9ILXVI
Bio Rep 2, Tec Rep 1
RNA-seq on cerebellar granule neuron - 14 days old
File
Gene Expression (tsv)
4DNFIOJMFR42
12.53m
35.71k
Experiment
4DNEXKTXFU3S
Bio Rep 3, Tec Rep 1
RNA-seq on cerebellar granule neuron - 14 days old
File
Gene Expression (tsv)
4DNFIVX76MYQ
8.96m
66.21k
Experiment
4DNEXPPHED93
Bio Rep 4, Tec Rep 1
RNA-seq on cerebellar granule neuron - 14 days old
File
Gene Expression (tsv)
4DNFILTMPXOG
12.95m
65.53k
Experiment
4DNEX4XN35NE
Bio Rep 5, Tec Rep 1
RNA-seq on cerebellar granule neuron - 14 days old
File
Gene Expression (tsv)
4DNFIFCIESTJ
12.15m
88.88k
Experiment
4DNEXJPWNQRM
Bio Rep 6, Tec Rep 1
RNA-seq on cerebellar granule neuron - 14 days old
File
Gene Expression (tsv)
4DNFIQDX6J5G
10.23m
166.67k