ExperimentSetReplicate

ExperimentSet4DNES8MO49F4
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single nucleus Hi-C on paternal pronuclei from G2 wildtype zygote

   June 22nd, 2018 at 5:38pm
Source Publication
A mechanism of cohesin-dependent loop extrusion organizes zygotic genome architecture.
Gassler J, Brandao HB, et al., The EMBO journal 2017

Experiment Set Properties  

Set Type 
Replicate
Organism 
M. musculus
Sample Type 
primary cells
Sample 
animal zygote
Experiment Type(s) 
sn-Hi-C
Modification Type 
None
Treatment Type 
None
Assay Details 
Enzyme: DpnII

34 Raw Files

Biosample
Experiment
File
File Size
Sequence Length
Overall Quality
Total Sequences
Biosample
4DNBS9L8BWN9
Bio Replicate 1
Experiment
4DNEXNJRNYN1
Tech Replicate 1
Pair
File
4DNFI38V5ZOF
1.29 GB
125
  Pass
21.27m
File
4DNFI4GLTY2X
1.3 GB
125
  Pass
21.27m
Biosample
4DNBSFR5S8JA
Bio Replicate 2
Experiment
4DNEXWRPSJ23
Tech Replicate 1
Pair 1
File
4DNFIVW32VS9
566.61 MB
125
  Pass
9.8m
File
4DNFIBCW8N9M
557.45 MB
125
  Pass
9.8m
Pair 2
File
4DNFIK83QTMQ
1.46 GB
125
  Pass
23.76m
File
4DNFIV6XPPA5
1.46 GB
125
  Pass
23.76m
Biosample
4DNBSRKEJ84D
Bio Replicate 3
Experiment
4DNEX2Q6243J
Tech Replicate 1
Pair 1
File
4DNFIFWKJTVQ
661.49 MB
125
  Pass
11.27m
File
4DNFIJU1REXU
648.89 MB
125
  Pass
11.27m
Pair 2
File
4DNFIRDF528Y
1.3 GB
125
  Pass
20.72m
File
4DNFIX14QVPB
1.3 GB
125
  Pass
20.72m
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