ExperimentSetReplicate

ExperimentSet4DNES7XKUUG1
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Set of Input for POL1RE TSA-seq Reaction Condition C (PBS 50% Sucrose, 1:3000 tyramide biotin) or Condition E (PBS 50% Sucrose, 1:300 tyramide biotin) 30 minute reaction on HCT116 cells

   November 2nd, 2021 at 7:42pm
Source Publication
Nucleolus and centromere TSA-Seq reveals variable localization of heterochromatin in different cell types.
Kumar P, Gholamalamdari O, et al., bioRxiv : the preprint server for biology 2023

Experiment Set Properties  

Set Type 
Replicate
Organism 
H. sapiens
Sample Type 
immortalized cells
Sample 
HCT116 (Tier 2)
Experiment Type(s) 
TSA-seq
Modification Type 
None
Treatment Type 
None
Assay Details 
Target: POLR1E protein

3 Raw Files

Biosample
Experiment
File
File Size
Sequence Length
Overall Quality
Total Sequences
Biosample
4DNBSKRLQJMM
Bio Replicate 1
Experiment
4DNEXWHEE1AN
Tech Replicate 1
File
File
4DNFI4CRQONH
1.62 GB
100
  Pass
36.75m
Biosample
4DNBSCJG8AVN
Bio Replicate 2
Experiment
4DNEXMBJQT85
Tech Replicate 1
File
File
4DNFIBETEQDU
2.16 GB
100
  Pass
48.79m
Biosample
4DNBSCJG8AVN
Bio Replicate 3
Experiment
4DNEX4BHMGQX
Tech Replicate 1
File
File
4DNFI83NY9BE
2.46 GB
100
  Pass
55.54m