ExperimentSetReplicate

ExperimentSet4DNES7IB5LY9
released

Replicates of CTCF in situ ChIA-PET on GM12878 cells.

   December 16th, 2019 at 10:50pm

Data Usage Guidelines  


Data Use Guidelines: This is a data set generated by the 4DN Network and made freely available to the scientific community. If you are intending to use these data for a publication, we ask that you please contact the data generating lab to discuss possible coordinated publication. In your manuscript, please cite the 4DN White Paper (doi:10.1038/nature23884) and the 4DN Data Portal paper (doi:10.1038/s41467-022-29697-4), and please acknowledge the 4DN lab which generated the data. Please direct any questions to the Data Coordination and Integration Center.


Experiment Set Properties  


Set Type 
Replicate
Organism 
Sample Type 
immortalized cells
Sample 
Experiment Type(s) 
Modification Type 
None
Treatment Type 
None
Assay Details 
Target: CTCF protein

8 Raw Files

Biosample
Experiment
File
File Size
Sequence Length
Overall Quality
Total Sequences
Biosample
4DNBSXKB4DTY
Bio Replicate 1
Experiment
4DNEXKAMU4M6
Tech Replicate 1
Pair 1
847.44 MB
151
  Pass
8.06m
899.76 MB
151
  Pass
8.06m
Pair 2
28.83 GB
151
  Pass
358.75m
32.2 GB
151
  Pass
358.75m
Biosample
4DNBSVA1G2HA
Bio Replicate 2
Experiment
4DNEXFLO7R6M
Tech Replicate 1
Pair 1
517.06 MB
151
  Pass
5.2m
553.79 MB
151
  Pass
5.2m
Pair 2
22.07 GB
151
  Pass
340.21m
22.8 GB
151
  Pass
340.21m