ExperimentSetReplicate

ExperimentSet4DNES77M4229
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Set of Inputs for DDX39B TSA-seq version 2 Reaction Condition 3' (PBS 50% Sucrose plus 1.5 mM DTT) 30 minute Reaction on U2OS cells

   December 19th, 2024 at 3:40pm
Source Publication
Highly active chromosome regions preferentially associate with two perispeckle networks that partition the interchromatin space
Venkata NC, Kim J, et al., bioRxiv 2025

Experiment Set Properties  

Set Type 
Replicate
Organism 
H. sapiens
Sample Type 
immortalized cells
Sample 
U2OS (Tier 2)
Experiment Type(s) 
TSA-seq
Modification Type 
None
Treatment Type 
None
Assay Details 
Target: DDX39B protein

3 Raw Files

Biosample
Experiment
File
File Size
Sequence Length
Overall Quality
Total Sequences
Biosample
4DNBSKR9NL37
Bio Replicate 1
Experiment
4DNEX12K8VKH
Tech Replicate 1
File
File
4DNFISAJWI32
2.17 GB
100
  Pass
49.25m
Biosample
4DNBS5PTAHOL
Bio Replicate 2
Experiment
4DNEXPJ7HY7K
Tech Replicate 1
File
File
4DNFI84RDUNA
1.58 GB
100
  Pass
34.86m
Experiment
4DNEX5X6G38R
Tech Replicate 2
File
File
4DNFIQY6FNK5
1.54 GB
100
  Pass
34.14m