ExperimentSetReplicate

ExperimentSet4DNES3U4BW57
released
View JSON

Replicates of P9_S fraction Repliseq on HCT116 WAPL AID-tagged cells - cells were grown, BrdU labeled and FACS sorted

   September 10th, 2021 at 11:58pm
Source Publication
Cohesin-mediated loop anchors confine the locations of human replication origins.
Emerson DJ, Zhao PA, et al., Nature 2022

Experiment Set Properties  

Set Type 
Replicate
Organism 
H. sapiens
Sample Type 
immortalized cells
Sample 
HCT116 with Crispr generated mClover and AID-tagged WAPL, AAVS1-OsTIR1(F74G)
Experiment Type(s) 
Multi-stage Repli-seq
Modification Type 
None
Treatment Type 
Chemical
Assay Details 
Fraction: P9 of 16 fractions

2 Processed Files

Quality Metrics

Experiment
For File
Total Aligned
Removed Duplicates
Details
Experiment
4DNEXVRMHWPS
Bio Rep 1, Tec Rep 1
Multi-stage Repli-seq on HCT116 with Crispr generated mClover and AID-tagged WAPL, AAVS1-OsTIR1(F74G) S-phase P9
File
Alignments (bam)
4DNFIQFXRE6X
36.33m
0.0%