ExperimentSetReplicate

ExperimentSet4DNES3CBZRX1
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RNA-seq on cerebellar granule neurons with ubash3b enhancer sgRNA isolated using FANS at day 8 after in vivo electroporation from dCas9-KRAB mouse postnatal day 14

   August 5th, 2025 at 7:34pm

Experiment Set Properties  

Set Type 
Replicate
Organism 
M. musculus
Sample Type 
primary cells
Sample 
cerebellar granule neuron - 8 days old
Experiment Type(s) 
RNA-seq
Modification Type 
Crispr
Treatment Type 
None
Assay Details 
None

30 Processed Files

Quality Metrics

Experiment
For File
Total mapped reads (genome)
Total uniquely mapped reads (genome)
Details
Experiment
4DNEXY5GCLIZ
Bio Rep 1, Tec Rep 1
RNA-seq on cerebellar granule neuron - 8 days old
File
Read Positions (bam)
4DNFIZXECF7T
25.33m
24.8m
Experiment
4DNEXGJW9W3Q
Bio Rep 2, Tec Rep 1
RNA-seq on cerebellar granule neuron - 8 days old
File
Read Positions (bam)
4DNFI2V8GKJ1
35.53m
34.79m
Experiment
4DNEXISUQBXD
Bio Rep 3, Tec Rep 1
RNA-seq on cerebellar granule neuron - 8 days old
File
Read Positions (bam)
4DNFI81EJC7B
23.51m
23m
Experiment
4DNEXP8BS49L
Bio Rep 4, Tec Rep 1
RNA-seq on cerebellar granule neuron - 8 days old
File
Read Positions (bam)
4DNFI5REXT62
39.42m
38.56m
Experiment
4DNEXS9AVVKD
Bio Rep 5, Tec Rep 1
RNA-seq on cerebellar granule neuron - 8 days old
File
Read Positions (bam)
4DNFI3KE3OC5
24.68m
24.14m
Experiment
4DNEX1PGPD57
Bio Rep 6, Tec Rep 1
RNA-seq on cerebellar granule neuron - 8 days old
File
Read Positions (bam)
4DNFIL6N5BHL
29.81m
29.13m
Experiment
For File
Reads mapped to protein-coding genes
Reads mapped to rRNA
Details
Experiment
4DNEXY5GCLIZ
Bio Rep 1, Tec Rep 1
RNA-seq on cerebellar granule neuron - 8 days old
File
Gene Expression (tsv)
4DNFINI5IIMG
8.17m
71.83k
Experiment
4DNEXGJW9W3Q
Bio Rep 2, Tec Rep 1
RNA-seq on cerebellar granule neuron - 8 days old
File
Gene Expression (tsv)
4DNFICTTV9P8
10.95m
43.58k
Experiment
4DNEXISUQBXD
Bio Rep 3, Tec Rep 1
RNA-seq on cerebellar granule neuron - 8 days old
File
Gene Expression (tsv)
4DNFIIZ94ZVU
7.61m
57.88k
Experiment
4DNEXP8BS49L
Bio Rep 4, Tec Rep 1
RNA-seq on cerebellar granule neuron - 8 days old
File
Gene Expression (tsv)
4DNFIF2N3DA1
12.33m
68.32k
Experiment
4DNEXS9AVVKD
Bio Rep 5, Tec Rep 1
RNA-seq on cerebellar granule neuron - 8 days old
File
Gene Expression (tsv)
4DNFITFPFNTC
8.51m
27.03k
Experiment
4DNEX1PGPD57
Bio Rep 6, Tec Rep 1
RNA-seq on cerebellar granule neuron - 8 days old
File
Gene Expression (tsv)
4DNFI4XM9JOV
9.95m
60.47k