ExperimentSetReplicate

Browser Suggestion

Google Chrome  or Mozilla Firefox are the recommended browser(s) for using the 4DN Data Portal.

Microsoft Edge, Safari, Opera etc. should work for a majority of portal functions but are not explicitly supported and may present some glitches, e.g. during submission.

ExperimentSet4DNES2ZND18K
released
View JSON

Replicates of SON Ab2 TSA-seq version 2 Reaction Condition 2 (PBS 50% Sucrose) Enhancement condition E (1:300 tyramide-biotin, 30 minute reaction) on lmna-lbr-ko-k562 cells

   October 18th, 2023 at 7:41pm
Source Publication
Beyond A and B Compartments: how major nuclear locales define nuclear genome organization and function.
Gholamalamdari O, van Schaik T, et al., bioRxiv : the preprint server for biology 2024

Experiment Set Properties  

Set Type 
Replicate
Organism 
H. sapiens
Sample Type 
immortalized cells
Sample 
K562 clone 5 with LMNA, LBR double knockout
Experiment Type(s) 
TSA-seq
Modification Type 
None
Treatment Type 
None
Assay Details 
Target: SON protein

1 Processed File

    Explore Data

Loading
Experiment
File
File Type
File Size
Notes
Experiment
4DNEX6F94KL9
Bio Rep 1, Tec Rep 1
TSA-seq against SON protein on K562 clone 5 with LMNA, LBR double knockout
File
4DNFIWRT1RIZ
normalized counts (bw)
1.06 MB