ExperimentSetReplicate

ExperimentSet4DNES2VWBL7Z
released
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SLAM-seq on 120 min post mitotic release dTAG treated dTAG-NIPBL clone D7 - 15 min 4sU labeling

   October 18th, 2024 at 2:36pm
Source Publication
Genome-wide in vivo dynamics of cohesin-mediated loop extrusion and its role in transcription activation
Popay TM, Pant A, et al., bioRxiv 2024

Experiment Set Properties  

Set Type 
Replicate
Organism 
H. sapiens
Sample Type 
immortalized cells
Sample 
dTAG-NIPBL hTERT-RPE-1 - clone D7
Experiment Type(s) 
SLAM-seq
Modification Type 
None
Treatment Type 
Chemical
Assay Details 
None

6 Raw Files

Biosample
Experiment
File
File Size
Sequence Length
Overall Quality
Total Sequences
Biosample
4DNBSYOJPQ2K
Bio Replicate 1
Experiment
4DNEXZB2FOMA
Tech Replicate 1
Pair
File
4DNFIBNNAAGJ
6.41 GB
101
  Pass
131.29m
File
4DNFITNJ86PC
6.57 GB
101
  Pass
131.29m
Biosample
4DNBST1XYTD2
Bio Replicate 2
Experiment
4DNEXHE2D2OF
Tech Replicate 1
Pair
File
4DNFIANMBNAS
6.74 GB
101
  Pass
137.98m
File
4DNFIAEOSPVL
6.96 GB
101
  Pass
137.98m
Biosample
4DNBS7T821YH
Bio Replicate 3
Experiment
4DNEXP1LIAUP
Tech Replicate 1
Pair
File
4DNFIRBZZNUY
5.59 GB
101
  Pass
114.81m
File
4DNFICJN5GOG
5.56 GB
101
  Pass
114.81m