ExperimentSetReplicate

ExperimentSet4DNES2P9J8KO
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DNA Paint on HFF Htert cells with 3 loci

   August 7th, 2018 at 12:58pm
Source Publication
Extensive Heterogeneity and Intrinsic Variation in Spatial Genome Organization.
Finn EH, Pegoraro G, et al., Cell 2019

Assay Description  

Experiment Set Properties  

Set Type 
Replicate
Organism 
H. sapiens
Sample Type 
immortalized cells
Sample 
HFF-hTERT
Experiment Type(s) 
DNA FISH
Modification Type 
None
Treatment Type 
None
Assay Details 
Target: Chromosomes, GRCh38:18:22075002-22239510 region, GRCh38:18:34992711-35151964 region, GRCh38:18:75525179-75695249 region
Channel
Path
 
ch00
Chromosomes targeted by DAPI
ch01
GRCh38:18:22075002-22239510 region targeted by Alexa Fluor 568-labeled BAC
ch02
GRCh38:18:34992711-35151964 region targeted by Alexa Fluor 488-labeled BAC
ch03
GRCh38:18:75525179-75695249 region targeted by Alexa Fluor 488-labeled BAC

4 Processed Files

Experiment
File
File Type
File Size
From Multiple Experiments
4DNES2P9J8KO
Multiple Experiments
File
4DNFID78GRES
locus distances, submitter format (txt)
26.34 kB
Experiment
4DNEXNETEXM8
Bio Rep 1, Tec Rep 1
DNA FISH on HFF-hTERT
File
4DNFIMM6H9L2
loci distances (txt)
196.8 kB
Experiment
4DNEXBNLK2C8
Bio Rep 1, Tec Rep 2
DNA FISH on HFF-hTERT
File
4DNFIDO1QWM7
loci distances (txt)
208.81 kB
Experiment
4DNEX1FSZV5E
Bio Rep 1, Tec Rep 3
DNA FISH on HFF-hTERT
File
4DNFI54T5PYR
loci distances (txt)
193.73 kB