ExperimentSetReplicate

ExperimentSet4DNES2LV4C4Q
released
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Replicates of P4_S fraction ReReplicates of Pliseq on H1-hESC Tier 1 cells - cells were grown, BrdU labeled and FACS sorted

   March 21st, 2019 at 8:42pm
Source Publication
High-resolution Repli-Seq defines the temporal choreography of initiation, elongation and termination of replication in mammalian cells.
Zhao PA, Sasaki T, et al., Genome biology 2020

Note: Replaced Item - 4DNES2LV4C4Q  

This experiment set supercedes 4DNESDUJHQ6J because a new biological replicate was added.

Experiment Set Properties  

Set Type 
Replicate
Organism 
H. sapiens
Sample Type 
stem cells
Sample 
H1-hESC (Tier 1)
Experiment Type(s) 
Multi-stage Repli-seq
Modification Type 
None
Treatment Type 
None
Assay Details 
Fraction: P4 of 16 fractions

4 Processed Files

Quality Metrics

Experiment
For File
Total Aligned
Removed Duplicates
Details
Experiment
4DNEX5M9XSGK
Bio Rep 1, Tec Rep 1
Multi-stage Repli-seq on H1-hESC (Tier 1) S-phase P4
File
Alignments (bam)
4DNFI37ID2F1
31.91m
4.835%
Experiment
4DNEX7KPBKXE
Bio Rep 2, Tec Rep 1
Multi-stage Repli-seq on H1-hESC (Tier 1) S-phase P4
File
Alignments (bam)
4DNFI44MKR9P
27.14m
5.459%