ExperimentSetReplicate

ExperimentSet4DNES2LPYB9R
released

Replicates of RNA-seq on LMNA R225X heterozygous (mutant) hIPSCs differentiated into cardioymyocytes

   February 20th, 2019 at 3:42am
Source Publication
Chromatin compartment dynamics in a haploinsufficient model of cardiac laminopathy.
Bertero A, Fields PA, et al., The Journal of cell biology 2019

Experiment Set Properties  


Set Type 
Replicate
Organism 
Sample Type 
induced pluripotent stem cells
Experiment Type(s) 
Modification Type 
None
Treatment Type 
None
Assay Details 
None

15 Processed Files

Quality Metrics

Experiment
For File
Total mapped reads (genome)
Total uniquely mapped reads (genome)
Details
Experiment
4DNEXXQGYVCI
Bio Rep 1, Tec Rep 1
RNA-seq on LMNA-R225X-het
File
Read Positions (bam)
4DNFIX8TO2MT
22.31m
14.75m
Experiment
4DNEXNX87CZG
Bio Rep 2, Tec Rep 1
RNA-seq on LMNA-R225X-het
File
Read Positions (bam)
4DNFI8XNJIPS
23.3m
20.18m
Experiment
4DNEXDL4O699
Bio Rep 3, Tec Rep 1
RNA-seq on LMNA-R225X-het
File
Read Positions (bam)
4DNFI336UDP2
22.36m
18.58m
Experiment
For File
Reads mapped to protein-coding genes
Reads mapped to rRNA
Details
Experiment
4DNEXXQGYVCI
Bio Rep 1, Tec Rep 1
RNA-seq on LMNA-R225X-het
File
Gene Expression (tsv)
4DNFIKDSV1B4
17.43m
1.49k
Experiment
4DNEXNX87CZG
Bio Rep 2, Tec Rep 1
RNA-seq on LMNA-R225X-het
File
Gene Expression (tsv)
4DNFI63H1FC6
23m
114
Experiment
4DNEXDL4O699
Bio Rep 3, Tec Rep 1
RNA-seq on LMNA-R225X-het
File
Gene Expression (tsv)
4DNFIKKPUF5S
21.73m
92