ExperimentSetReplicate

ExperimentSet4DNESDRL8DZM
replaced
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Replicates CUT&RUN experiments on H1 cells using Ring1B (ab101273) with a digestion time of 3min

   April 25th, 2018 at 5:06pm

Note: Replaced Item - 4DNESDRL8DZM  

This experiment set was replaced by 4DNESH1CQ1ZV because existing sets from the same line and using the same antibody that differed only in reaction time (a variable determined to not qualitatively affect the results) were merged into a single replicate set.

Data Usage Guidelines  

Data Use Guidelines: This is a data set generated by the 4DN Network and made freely available to the scientific community. If you are intending to use these data for a publication, we ask that you please contact the data generating lab to discuss possible coordinated publication. In your manuscript, please cite the 4DN White Paper (doi:10.1038/nature23884) and the 4DN Data Portal paper (doi:10.1038/s41467-022-29697-4), and please acknowledge the 4DN lab which generated the data. Please direct any questions to the Data Coordination and Integration Center.

Experiment Set Properties  

Set Type 
Replicate
Organism 
H. sapiens
Sample Type 
stem cells
Sample 
H1-hESC (Tier 1)
Experiment Type(s) 
CUT&RUN
Modification Type 
None
Treatment Type 
None
Assay Details 
Target: Ring2_1b protein

3 Processed Files

Experiment
File
File Type
File Size
Experiment
4DNEX2K7Y1NK
Bio Rep 1, Tec Rep 1
CUT&RUN against Ring2_1b protein on H1-hESC (Tier 1)
File
4DNFI49ECIPV
read positions (bam)
1.88 GB
File
no view permissions
-
Experiment
4DNEXKEZ4895
Bio Rep 2, Tec Rep 1
CUT&RUN against Ring2_1b protein on H1-hESC (Tier 1)
File
4DNFI9Z6UMEF
read positions (bam)
2.52 GB
File
no view permissions
-