ExperimentSetReplicate

ExperimentSet4DNESAY5QDKX
replaced

Replicates of CUT&RUN on K562 cells using H3K27ac (ab4729) with a digestion time of 1min

   February 23rd, 2018 at 8:44am

Note: Replaced Item - 4DNESAY5QDKX  


This experiment set was replaced by 4DNESEWHOTAN because existing sets from the same line and using the same antibody that differed only in reaction time (a variable determined to not qualitatively affect the results) were merged into a single replicate set.

Data Usage Guidelines  


Data Use Guidelines: This is a data set generated by the 4DN Network and made freely available to the scientific community. If you are intending to use these data for a publication, we ask that you please contact the data generating lab to discuss possible coordinated publication. In your manuscript, please cite the 4DN White Paper (doi:10.1038/nature23884) and the 4DN Data Portal paper (doi:10.1038/s41467-022-29697-4), and please acknowledge the 4DN lab which generated the data. Please direct any questions to the Data Coordination and Integration Center.


Experiment Set Properties  


Set Type 
Replicate
Organism 
Sample Type 
immortalized cells
Experiment Type(s) 
Modification Type 
None
Treatment Type 
None
Assay Details 
Target: H3K27ac

8 Raw Files

Biosample
Experiment
File
File Size
Sequence Length
Overall Quality
Total Sequences
Biosample
4DNBSQ1RCXFX
Bio Replicate 1
Experiment
4DNEX6XMZ23B
Tech Replicate 1
Pair 1
104.55 MB
25
  Pass
4m
107.47 MB
25
  Pass
4m
Pair 2
104.32 MB
25
  Pass
4m
107.15 MB
25
  Pass
4m
Pair 3
104.42 MB
25
  Pass
4m
107.07 MB
25
  Pass
4m
Pair 4
1.37 MB
25
  Pass
51.34k
1.39 MB
25
  Pass
51.34k