Included Properties
Data Type
Organ/System
Assay Details
Set Type
Produced in Publication
18 Common Properties
Project
4DN
Lab
Siyuan Wang, YALE
Experiment Category
Microscopy
Experiment Type
FISH
Dataset
Chromatin tracing of single chromosomes
Organism
Human
Sample Type
primary cells
Sample Tier
Unclassified
Sample Category
IMR-90
Sample
IMR-90
Tissue Source
fibroblast of lung
Publication
Wang S et al. (2016) PMID:27445307
Modifications
No value
Treatments
No value
Center
OFHHD - Schatz
Status
Released
Commendations
No value
Warnings
Biosample Metadata Incomplete
Title
Experiment Type
Biosample
Dataset
Condition
Assay Details
Lab
multiplexed FISH
IMR-90
Chromatin tracing of single chromosomes
Chromatin tracing of chr20 in human IMR90 cells
Target
15 TADs on Chr20 #1-15, 15 TADs on Chr20 #15-30, 30 TADs on Chr20 #1-30
multiplexed FISH
IMR-90
Chromatin tracing of single chromosomes
Chromatin tracing of chr21 in human IMR90 cells
Target
17 TADs on Chr21 #1-17, 17 TADs on Chr21 #18-34, 34 TADs on Chr21 #1-34
multiplexed FISH
IMR-90
Chromatin tracing of single chromosomes
Chromatin tracing of chr22 in human IMR90 cells
Target
14 TADs on Chr22 #1-14, 13 TADs on Chr22 #15-27, 27 TADs on Chr22 #1-27
multiplexed FISH
IMR-90
Chromatin tracing of single chromosomes
Chromatin tracing of chrX (Xa) in human IMR90 cells
Target
20 TADs on ChrX #1-20, 20 TADs on ChrX #21-40, 40 TADs on ChrX #1-40
multiplexed FISH
IMR-90
Chromatin tracing of single chromosomes
Chromatin tracing of chrX (Xi) in human IMR90 cells
Target
20 TADs on ChrX #1-20, 20 TADs on ChrX #21-40, 40 TADs on ChrX #1-40
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