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Properties

Experiment Type
Organism
Sample Type
Sample Tier
Sample Category
Sample
Organ/System
Tissue Source
Treatments
Assay Details
Commendations
Warnings
7 Common Properties
 Project
4DN
 Lab
David Baddeley, YALE
 Experiment Category
Microscopy
 Publication
Barentine AES et al. (2022) doi:10.1101/606954
 Modifications
No value
 Center
IT - Bewersdorf
 Status
Released
Title
Experiment Type
Biosample
Dataset
Condition
Assay Details
Lab
Immunofluorescence
U2OS (Tier 2)
SMSN (Barentine et al 2019 bioRxiv)
Lamin/nucleolus in U2OS
Target
NPM1 protein, LMNB1 protein
Immunofluorescence
U2OS (Tier 2)
SMSN (Barentine et al 2019 bioRxiv)
DNA/mitochondria in U2OS
Target
TOMM20 protein, Chromosomes
DNA FISH
IMR-90 (Tier 1)
SMSN (Barentine et al 2019 bioRxiv)
LAD/TAD in IMR90
Target
GRCh38:5:116144601-116449681 region, Chromosome 22 TADs
DNA FISH
IMR-90 (Tier 1)
SMSN (Barentine et al 2019 bioRxiv)
LAD/lamin in IMR90
Target
Human chr13 LAD (pool 2), LaminA/C protein
Immunofluorescence
COS-7
SMSN (Barentine et al 2019 bioRxiv)
Microtubules and ER in COS-7
Target
SEC61B protein with N-terminus mEmerald, TUBA4A green monkey protein
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