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Properties

Sample Tier
Sample Category
Sample
Publication
Assay Details
Warnings
14 Common Properties
 Project
4DN
 Lab
Job Dekker, UMMS
 Experiment Category
Sequencing
 Experiment Type
in situ Hi-C
 Organism
Human
 Sample Type
in vitro differentiated cells
 Organ/System
endoderm
 Tissue Source
definitive endoderm
 Modifications
No value
 Treatments
No value
 Center
NOFIC - Dekker
 Status
Released
 Commendations
No value
 Validation Errors
No value
Title
Experiment Type
Biosample
Dataset
Condition
Assay Details
Lab
in situ Hi-C
H1-hESC differentiated to definitive endoderm
Hi-C on H1-DE cells - protocol variations
Formaldehyde, HindIII
Enzyme
HindIII
in situ Hi-C
H1-hESC differentiated to definitive endoderm
Hi-C on H1-DE cells - protocol variations
Formaldehyde, DpnII
Enzyme
DpnII
in situ Hi-C
H1-hESC differentiated to definitive endoderm
Hi-C on H1-DE cells - protocol variations
Formaldehyde, DdeI
Enzyme
DdeI
in situ Hi-C
H1-hESC differentiated to definitive endoderm
Hi-C on H1-DE cells - protocol variations
Formaldehyde+EGS, HindIII
Enzyme
HindIII
in situ Hi-C
H1-hESC differentiated to definitive endoderm
Hi-C on H1-DE cells - protocol variations
Formaldehyde+EGS, DpnII
Enzyme
DpnII
in situ Hi-C
H1-hESC differentiated to definitive endoderm
Hi-C on H1-DE cells - protocol variations
Formaldehyde+EGS, DdeI
Enzyme
DdeI
in situ Hi-C
H1-hESC differentiated to definitive endoderm
Hi-C on H1-DE cells - protocol variations
Formaldehyde+DSG, HindIII
Enzyme
HindIII
in situ Hi-C
H1-hESC differentiated to definitive endoderm
Hi-C on H1-DE cells - protocol variations
Formaldehyde+DSG, DpnII
Enzyme
DpnII
in situ Hi-C
H1-hESC differentiated to definitive endoderm
Hi-C on H1-DE cells - protocol variations
Formaldehyde+DSG, DdeI
Enzyme
DdeI
in situ Hi-C
H1-hESC (Tier 1) differentiated to definitive endoderm
Hi-C on H1-DE cells - protocol variations
Formaldehyde, DpnII, H1-DE (Tier 1)
Enzyme
DpnII
in situ Hi-C
H1-hESC differentiated to definitive endoderm
Hi-C on H1-DE cells - protocol variations
Formaldehyde, DpnII
Enzyme
DpnII
- fin -