Data Browser
Filter & browse experiments

Browser Suggestion

Google Chrome  or Mozilla Firefox are the recommended browser(s) for using the 4DN Data Portal.

Microsoft Edge, Safari, Opera etc. should work for a majority of portal functions but are not explicitly supported and may present some glitches, e.g. during submission.

Included Properties

Set Type
Warnings
18 Common Properties
 Project
4DN
 Lab
Alistair Boettiger, STANFORD
 Experiment Category
Microscopy
 Experiment Type
FISH
 Dataset
Multiplexed FISH in mouse ESC-E14
 Organism
Mouse
 Sample Type
stem cells
 Sample Tier
Unclassified
 Sample Category
Mouse stem cell
 Sample
ES-E14TG2a
 Organ/System
No value
 Tissue Source
stem cell
 Publication
Le DJ et al. (2024) doi:10.1101/2024.05.08.593251
 Modifications
No value
 Treatments
No value
 Center
Bintu
 Status
Released
 Commendations
No value
Title
Experiment Type
Biosample
Dataset
Condition
Assay Details
Lab
multiplexed FISH
ES-E14TG2a
Multiplexed FISH in mouse ESC-E14
ORCA + RNA-FISH for 44 SEs 15-kb resolution
Target
374 genomic regions, 21 transcripts
multiplexed FISH
ES-E14TG2a
Multiplexed FISH in mouse ESC-E14
ORCA for 376 SEs 15-kb resolution
Target
374 genomic regions
- fin -