Included Properties
Data Type
Lab
Experiment Type
Dataset
Sample
Organ/System
Publication
Treatments
Assay Details
Center
Set Type
Commendations
Warnings
9 Common Properties
Project
4DN
Experiment Category
Sequencing
Organism
Human
Sample Type
immortalized cells
Sample Tier
Tier 2
Sample Category
Tier 2
Tissue Source
kidney
Modifications
No value
Status
Released
Title
Experiment Type
Biosample
Dataset
Condition
Assay Details
Lab
BLISS
HEK293 (Tier 2)
BLISS on HEK293 cells after multi-target Crispr
no treatment control
-
BLISS
HEK293 (Tier 2)
BLISS on HEK293 cells after multi-target Crispr
caged AluGG cgRNA (light activated) - 30 min light
-
BLISS
HEK293 (Tier 2)
BLISS on HEK293 cells after multi-target Crispr
caged AluGG cgRNA (light activated) - 10 min light
-
BLISS
HEK293 (Tier 2)
BLISS on HEK293 cells after multi-target Crispr
caged AluGG cgRNA (light activated) - no light
-
BLISS
HEK293 (Tier 2)
BLISS on HEK293 cells after multi-target Crispr
3 h after Cas9-AluGG mgRNA
-
ATAC-seq
HEK293 (Tier 2)
ATAC-Seq on HEK293 cells after multi-target Crispr
no treatment control
-
ATAC-seq
HEK293 (Tier 2)
ATAC-Seq on HEK293 cells after multi-target Crispr
photocleavable mgRNA - 4 h post light
-
ATAC-seq
HEK293 (Tier 2)
ATAC-Seq on HEK293 cells after multi-target Crispr
photocleavable mgRNA - 2 h post light
-
ATAC-seq
HEK293 (Tier 2)
ATAC-Seq on HEK293 cells after multi-target Crispr
photocleavable mgRNA - 1 h post light
-
ATAC-seq
HEK293 (Tier 2)
ATAC-Seq on HEK293 cells after multi-target Crispr
photocleavable mgRNA - no light control
-
ATAC-seq
HEK293 (Tier 2)
ATAC-Seq on HEK293 cells after multi-target Crispr
light activated caged mgRNA - 30 minute post light
-
ATAC-seq
HEK293 (Tier 2)
ATAC-Seq on HEK293 cells after multi-target Crispr
light activated caged mgRNA - 10 minute post light
-
ATAC-seq
HEK293 (Tier 2)
ATAC-Seq on HEK293 cells after multi-target Crispr
light activated caged mgRNA - no light control
-
ATAC-seq
HEK293 (Tier 2)
ATAC-Seq on HEK293 cells after multi-target Crispr
regular AluGG mgRNA - 3h
-
ChIP-seq
HEK293 (Tier 2)
ChIP-seq on HEK293 cells after multi-target light de-activatable Crispr
MRE11 IP with photocleavable AluGG mgRNA - 4h post light
Target
MRE11 protein
ChIP-seq
HEK293 (Tier 2)
ChIP-seq on HEK293 cells after multi-target light de-activatable Crispr
MRE11 IP with photocleavable AluGG mgRNA - 2h post light
Target
MRE11 protein
ChIP-seq
HEK293 (Tier 2)
ChIP-seq on HEK293 cells after multi-target light de-activatable Crispr
MRE11 IP with photocleavable AluGG mgRNA - 1h post light
Target
MRE11 protein
ChIP-seq
HEK293 (Tier 2)
ChIP-seq on HEK293 cells after multi-target light de-activatable Crispr
MRE11 IP with photocleavable AluGG mgRNA - no light control
Target
MRE11 protein
ChIP-seq
HEK293 (Tier 2)
ChIP-seq on HEK293 cells after multi-target Crispr - inactive nuclease dCas9
MRE11 IP with regular AluGG mgRNA - 3h
Target
cas9 engineered reagent protein
ChIP-seq
HEK293 (Tier 2)
ChIP-seq on HEK293 cells after multi-target Crispr - inactive nuclease dCas9
MRE11 IP with regular AluGG mgRNA - 30 min
Target
cas9 engineered reagent protein
ChIP-seq
HEK293 (Tier 2)
ChIP-seq on HEK293 cells after multi-target Crispr
MRE11 IP with regular AluGG mgRNA - 30 min
Target
MRE11 protein
ChIP-seq
HEK293 (Tier 2)
ChIP-seq on HEK293 cells after multi-target Crispr
53BP1 IP with regular AluTA mgRNA - 3h
Target
TP53BP1 protein
ChIP-seq
HEK293 (Tier 2)
ChIP-seq on HEK293 cells after multi-target Crispr
gamma H2A.X IP with regular AluTA mgRNA - 3h
Target
gamma H2A.X
ChIP-seq
HEK293 (Tier 2)
ChIP-seq on HEK293 cells after multi-target Crispr
MRE11 IP with regular AluTA mgRNA - 3h
Target
MRE11 protein
ChIP-seq
HEK293 (Tier 2)
ChIP-seq on HEK293 cells after multi-target Crispr
Cas9 IP with regular AluTA mgRNA - 3h
Target
cas9 engineered reagent protein