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Included Properties

Data Type
  • ExperimentSetReplicate1
  • Experiment Set1
    • Dataset
  • SPT on U2OS cells for Spot-On analysis0
  • Immunofluorescence on synchronyzed HeLa cells135
  • No value100
  • Hi-C on RAD21-AID tagged HCT-11658
  • RNA-seq on monocytes from b-ALL patient53
  • ATAC-seq on monocytes from b-ALL patient44
  • Hi-C on monocytes from b-ALL patient36
  • Hi-C on GM12878 cells - protocol variations28
  • LaminB1 DamID-seq on mouse zygotes with transcripts overexpressed27
  • LaminB1 DamID-seq on mouse 2-cell embryos with transcripts overexpressed24
    • View 91 More1082
    Organ/System
  • bone element1
  • skeletal system1
    • Set Type
  • Replicate1
    • UUID
  • No value44
    • 18 Common Properties
     Project
    4DN
     Lab
    Xavier Darzacq, BERKELEY
     Experiment Category
    Microscopy
     Experiment Type
    SPT
     Organism
    Human
     Sample Type
    immortalized cells
     Sample Tier
    Unclassified
     Sample Category
    Tier 2
     Sample
    U2OS
     Tissue Source
    bone tissue
     Publication
    Hansen AS et al. (2018) doi:10.7554/eLife.33125
     Modifications
    Crispr
     Treatments
    No value
     Assay Details
    Target: CTCF protein
     Center
    IT - Singer
     Status
    Released
     Commendations
    No value
     Warnings
    Biosample Metadata Incomplete
    Title
    Experiment Type
    Biosample
    Dataset
    Condition
    Assay Details
    Lab
    4DNESUBTIGKA
    SPT
    U2OS
    SPT on U2OS cells for Spot-On analysis
    1 ms pulse on U2OS C32 Halo-CTCF at 200Hz
    Target
    CTCF protein
    Xavier Darzacq, BERKELEY
    - fin -