Included Properties
Data Type
Dataset
Organ/System
Treatments
Set Type
17 Common Properties
Project
4DN
Lab
Job Dekker, UMMS
Experiment Category
Sequencing
Experiment Type
Hi-C
Organism
Human
Sample Type
immortalized cells
Sample Tier
Unclassified
Sample Category
Other
Sample
HeLa-S3
Tissue Source
uterine cervix
Publication
Abramo K et al. (2019) PMID:31685986
Modifications
No value
Assay Details
Enzyme: DpnII
Center
NOFIC - Dekker
Status
Released
Commendations
No value
Warnings
Replicate Numbers
Title
Experiment Type
Biosample
Dataset
Condition
Assay Details
Lab
in situ Hi-C
HeLa-S3
Hi-C on sync. HeLa cells - Rep1
Before prometaphase arrest (asynchronous control)
Enzyme
DpnII
in situ Hi-C
HeLa-S3
Hi-C on sync. HeLa cells - Rep1
Prometaphase arrest
Enzyme
DpnII
in situ Hi-C
HeLa-S3
Hi-C on sync. HeLa cells - Rep1
0.5 hours after release from prometaphase arrest
Enzyme
DpnII
in situ Hi-C
HeLa-S3
Hi-C on sync. HeLa cells - Rep1
1 hour after release from prometaphase arrest
Enzyme
DpnII
in situ Hi-C
HeLa-S3
Hi-C on sync. HeLa cells - Rep1
1.5 hours after release from prometaphase arrest
Enzyme
DpnII
in situ Hi-C
HeLa-S3
Hi-C on sync. HeLa cells - Rep1
1.75 hours after release from prometaphase arrest
Enzyme
DpnII
in situ Hi-C
HeLa-S3
Hi-C on sync. HeLa cells - Rep1
2 hours after release from prometaphase arrest
Enzyme
DpnII
in situ Hi-C
HeLa-S3
Hi-C on sync. HeLa cells - Rep1
2.25 hours after release from prometaphase arrest
Enzyme
DpnII
in situ Hi-C
HeLa-S3
Hi-C on sync. HeLa cells - Rep1
2.5 hours after release from prometaphase arrest
Enzyme
DpnII
in situ Hi-C
HeLa-S3
Hi-C on sync. HeLa cells - Rep1
2.75 hours after release from prometaphase arrest
Enzyme
DpnII
in situ Hi-C
HeLa-S3
Hi-C on sync. HeLa cells - Rep1
3 hours after release from prometaphase arrest
Enzyme
DpnII
in situ Hi-C
HeLa-S3
Hi-C on sync. HeLa cells - Rep1
3.25 hours after release from prometaphase arrest
Enzyme
DpnII
in situ Hi-C
HeLa-S3
Hi-C on sync. HeLa cells - Rep1
3.5 hours after release from prometaphase arrest
Enzyme
DpnII
in situ Hi-C
HeLa-S3
Hi-C on sync. HeLa cells - Rep1
4 hours after release from prometaphase arrest
Enzyme
DpnII
in situ Hi-C
HeLa-S3
Hi-C on sync. HeLa cells - Rep1
4.5 hours after release from prometaphase arrest
Enzyme
DpnII
in situ Hi-C
HeLa-S3
Hi-C on sync. HeLa cells - Rep1
5 hours after release from prometaphase arrest
Enzyme
DpnII
in situ Hi-C
HeLa-S3
Hi-C on sync. HeLa cells - Rep1
6 hours after release from prometaphase arrest
Enzyme
DpnII
in situ Hi-C
HeLa-S3
Hi-C on sync. HeLa cells - Rep1
7 hours after release from prometaphase arrest
Enzyme
DpnII
in situ Hi-C
HeLa-S3
Hi-C on sync. HeLa cells - Rep1
8 hours after release from prometaphase arrest
Enzyme
DpnII
in situ Hi-C
HeLa-S3
Hi-C on sync. HeLa cells - Rep1
9 hours after release from prometaphase arrest
Enzyme
DpnII
in situ Hi-C
HeLa-S3
Hi-C on sync. HeLa cells - Rep1
10 hours after release from prometaphase arrest
Enzyme
DpnII
in situ Hi-C
HeLa-S3
Hi-C on sync. HeLa cells - Rep1
11 hours after release from prometaphase arrest
Enzyme
DpnII
in situ Hi-C
HeLa-S3
Hi-C on sync. HeLa cells - Rep1
12 hours after release from prometaphase arrest
Enzyme
DpnII
- fin -