ExperimentSetReplicate

ExperimentSet4DNESUZ6TLXH
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DNA Paint on HFF Htert cells with 3 loci

   July 25th, 2018 at 7:52pm
Source Publication
Extensive Heterogeneity and Intrinsic Variation in Spatial Genome Organization.
Finn EH, Pegoraro G, et al., Cell 2019

Assay Description  

Experiment Set Properties  

Set Type 
Replicate
Organism 
H. sapiens
Sample Type 
immortalized cells
Sample 
HFF-hTERT
Experiment Type(s) 
DNA FISH
Modification Type 
None
Treatment Type 
None
Assay Details 
Target: Chromosomes, GRCh38:4:55053142-55196692 region, GRCh38:4:54542457-54695030 region, GRCh38:4:55367316-55516239 region
Channel
Path
 
ch00
Chromosomes targeted by DAPI
ch01
GRCh38:4:55053142-55196692 region targeted by Alexa Fluor 568-labeled BAC
ch02
GRCh38:4:54542457-54695030 region targeted by Alexa Fluor 488-labeled BAC
ch03
GRCh38:4:55367316-55516239 region targeted by Cy5-labeled BAC

4 Processed Files

Experiment
File
File Type
File Size
From Multiple Experiments
4DNESUZ6TLXH
Multiple Experiments
File
4DNFID78GRES
locus distances, submitter format (txt)
26.34 kB
Experiment
4DNEXY3ITUKH
Bio Rep 1, Tec Rep 1
DNA FISH on HFF-hTERT
File
4DNFI4RUATH1
loci distances (txt)
116.46 kB
Experiment
4DNEXPHJ4TS8
Bio Rep 1, Tec Rep 2
DNA FISH on HFF-hTERT
File
4DNFIZ5WHFIJ
loci distances (txt)
149.89 kB
Experiment
4DNEX38FC31Z
Bio Rep 1, Tec Rep 3
DNA FISH on HFF-hTERT
File
4DNFID2UJ3OY
loci distances (txt)
114.31 kB