ExperimentSetReplicate

ExperimentSet4DNESRPQE989
released

RNA-seq on Peripheral blood mononuclear cells from MCG032

   October 24th, 2024 at 9:01pm

Data Usage Guidelines  


Data Use Guidelines: This is a data set generated by the 4DN Network and made freely available to the scientific community. If you are intending to use these data for a publication, we ask that you please contact the data generating lab to discuss possible coordinated publication. In your manuscript, please cite the 4DN White Paper (doi:10.1038/nature23884) and the 4DN Data Portal paper (doi:10.1038/s41467-022-29697-4), and please acknowledge the 4DN lab which generated the data. Please direct any questions to the Data Coordination and Integration Center.


Experiment Set Properties  


Set Type 
Replicate
Organism 
Sample Type 
primary cells
Experiment Type(s) 
Modification Type 
None
Treatment Type 
None
Assay Details 
None

10 Processed Files

Quality Metrics

Experiment
For File
Total mapped reads (genome)
Total uniquely mapped reads (genome)
Details
Experiment
4DNEXY451PU5
Bio Rep 1, Tec Rep 1
RNA-seq on MCG032 Peripheral blood mononuclear cells
File
Read Positions (bam)
4DNFIE7WMATE
14.69m
12.91m
Experiment
4DNEXYV94NBI
Bio Rep 1, Tec Rep 2
RNA-seq on MCG032 Peripheral blood mononuclear cells
File
Read Positions (bam)
4DNFI7KA6SAR
24.06m
21.56m
Experiment
For File
Reads mapped to protein-coding genes
Reads mapped to rRNA
Details
Experiment
4DNEXY451PU5
Bio Rep 1, Tec Rep 1
RNA-seq on MCG032 Peripheral blood mononuclear cells
File
Gene Expression (tsv)
4DNFID7DQ8RM
22.46m
24
Experiment
4DNEXYV94NBI
Bio Rep 1, Tec Rep 2
RNA-seq on MCG032 Peripheral blood mononuclear cells
File
Gene Expression (tsv)
4DNFIU15DPYB
33.81m
340