ExperimentSetReplicate

ExperimentSet4DNESN1DBVBN
released

ATAC-seq on primary motor cortex from Rhesus monkey - R2

   April 12th, 2024 at 11:40pm
Source Publication

Aggregated non-redundant peaks - NoRef  


NOTE Non-redundant peaks aggregated from multiple donors in bed format is provided as a supplementary file. As 4DN does not host the genome assembly for this organism, this bed file cannot be visualized using HiGlass tool. However, users can download HiGlass tool from here for visualization purposes. While visualizing file through HiGlass please note that peaks of a specific cell type are represented using different track colors. Additionally, a zipped folder containing individual bed files specific for each cell type is also provided. The information on track colors and associated cell type can be accessed via a key file here


Experiment Set Properties  


Set Type 
Replicate
Organism 
Sample Type 
tissue
Experiment Type(s) 
Modification Type 
None
Treatment Type 
None
Assay Details 
None

27 Raw Files

Biosample
Experiment
File
File Size
Sequence Length
Overall Quality
Total Sequences
Biosample
4DNBS1I3GHTA
Bio Replicate 1
Experiment
4DNEXZNACIDR
Tech Replicate 1
Grp 1
1.99 GB
101
  Pass
41.43m
1.96 GB
101
  Pass
41.43m
697.71 MB
24
  Pass
41.43m
Grp 2
1.94 GB
101
  Pass
40.28m
1.91 GB
101
  Pass
40.28m
677.56 MB
24
  Pass
40.28m
Grp 3
1.94 GB
101
  Pass
40.18m
1.91 GB
101
  Pass
40.18m
678.38 MB
24
  Pass
40.18m
Grp 4
100.07 MB
50
  Pass
3.19m
101.2 MB
50
  Pass
3.19m
52.31 MB
16
  Pass
3.19m
Grp 5
100.14 MB
50
  Pass
3.23m
100.91 MB
50
  Pass
3.23m
52.97 MB
16
  Pass
3.23m
Grp 6
97.39 MB
50
  Pass
3.13m
98.43 MB
50
  Pass
3.13m
51.2 MB
16
  Pass
3.13m
Grp 7
97.51 MB
50
  Pass
3.13m
98.63 MB
50
  Pass
3.13m
51.69 MB
16
  Pass
3.13m
Grp 8
4.5 GB
101
  Pass
89.83m
4.41 GB
101
  Pass
89.83m
1.47 GB
24
  Pass
89.83m
Grp 9
4.48 GB
101
  Pass
89.38m
4.4 GB
101
  Pass
89.38m
1.46 GB
24
  Pass
89.38m