ExperimentSetReplicate

ExperimentSet4DNESJB4L2JQ
released
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DNA Paint on HFF Htert cells with 3 loci

   August 10th, 2018 at 1:48pm
Source Publication
Extensive Heterogeneity and Intrinsic Variation in Spatial Genome Organization.
Finn EH, Pegoraro G, et al., Cell 2019

Assay Description  

Experiment Set Properties  

Set Type 
Replicate
Organism 
H. sapiens
Sample Type 
immortalized cells
Sample 
HFF-hTERT
Experiment Type(s) 
DNA FISH
Modification Type 
None
Treatment Type 
None
Assay Details 
Target: Chromosomes, GRCh38:17:51274882-51467771 region, GRCh38:17:33020947-33186327 region, GRCh38:17:30541949-30739347 region
Channel
Path
 
ch00
Chromosomes targeted by DAPI
ch01
GRCh38:17:51274882-51467771 region targeted by Cy5-labeled BAC
ch02
GRCh38:17:33020947-33186327 region targeted by Alexa Fluor 568-labeled BAC
ch03
GRCh38:17:30541949-30739347 region targeted by Alexa Fluor 488-labeled BAC

4 Processed Files

Experiment
File
File Type
File Size
From Multiple Experiments
4DNESJB4L2JQ
Multiple Experiments
File
4DNFID78GRES
locus distances, submitter format (txt)
26.34 kB
Experiment
4DNEXS8S7TC8
Bio Rep 1, Tec Rep 1
DNA FISH on HFF-hTERT
File
4DNFI7RSPJNK
loci distances (txt)
146.77 kB
Experiment
4DNEXMRIUVY4
Bio Rep 1, Tec Rep 2
DNA FISH on HFF-hTERT
File
4DNFIV17FFQ8
loci distances (txt)
130.03 kB
Experiment
4DNEXX5DW91E
Bio Rep 1, Tec Rep 3
DNA FISH on HFF-hTERT
File
4DNFINLNY2F1
loci distances (txt)
148.7 kB