ExperimentSetReplicate

ExperimentSet4DNESHORE85H
released
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DNA Paint on HFF Htert cells with 3 loci

   August 13th, 2018 at 4:06pm
Source Publication
Extensive Heterogeneity and Intrinsic Variation in Spatial Genome Organization.
Finn EH, Pegoraro G, et al., Cell 2019

Assay Description  

Experiment Set Properties  

Set Type 
Replicate
Organism 
H. sapiens
Sample Type 
immortalized cells
Sample 
HFF-hTERT
Experiment Type(s) 
DNA FISH
Modification Type 
None
Treatment Type 
None
Assay Details 
Target: Chromosomes, GRCh38:1:89759075-89913486 region, GRCh38:1:115549997-115729561 region, GRCh38:1:105256970-105427280 region
Channel
Path
 
ch00
Chromosomes targeted by DAPI
ch01
GRCh38:1:89759075-89913486 region targeted by Cy5-labeled BAC
ch02
GRCh38:1:115549997-115729561 region targeted by Alexa Fluor 568-labeled BAC
ch03
GRCh38:1:105256970-105427280 region targeted by Alexa Fluor 488-labeled BAC

5 Processed Files

Experiment
File
File Type
File Size
From Multiple Experiments
4DNESHORE85H
Multiple Experiments
File
4DNFID78GRES
locus distances, submitter format (txt)
26.34 kB
Experiment
4DNEX8EPZG9U
Bio Rep 1, Tec Rep 4
DNA FISH on HFF-hTERT
File
4DNFIBIODMBM
loci distances (txt)
195.06 kB
Experiment
4DNEXXLB4NW2
Bio Rep 1, Tec Rep 5
DNA FISH on HFF-hTERT
File
4DNFIQE5FEDU
loci distances (txt)
188.41 kB
Experiment
4DNEXTB6LA84
Bio Rep 1, Tec Rep 2
DNA FISH on HFF-hTERT
File
4DNFIR85VD55
loci distances (txt)
162.79 kB
Experiment
4DNEXJUIW5OB
Bio Rep 1, Tec Rep 3
DNA FISH on HFF-hTERT
File
4DNFINU2KUO8
loci distances (txt)
157.08 kB
Experiment
File
File Type
File Size
Experiment
4DNEXCJZY3DY
Bio Rep 1, Tec Rep 4
DNA FISH on HFF-hTERT
-
-
-
Experiment
4DNEXTFI9AW6
Bio Rep 1, Tec Rep 5
DNA FISH on HFF-hTERT
-
-
-