ExperimentSetReplicate

ExperimentSet4DNESGQHZPAV
released

RNA-seq on primary motor cortex from Rhesus monkey - R2

   April 16th, 2024 at 3:23pm
Source Publication

Aggregated non-redundant peaks - NoRef  


NOTE Non-redundant peaks aggregated from multiple donors in bed format is provided as a supplementary file. As 4DN does not host the genome assembly for this organism, this bed file cannot be visualized using HiGlass tool. However, users can download HiGlass tool from here for visualization purposes. While visualizing file through HiGlass please note that peaks of a specific cell type are represented using different track colors. Additionally, a zipped folder containing individual bed files specific for each cell type is also provided. The information on track colors and associated cell type can be accessed via a key file here


Experiment Set Properties  


Set Type 
Replicate
Organism 
Sample Type 
tissue
Experiment Type(s) 
Modification Type 
None
Treatment Type 
None
Assay Details 
None

12 Raw Files

Biosample
Experiment
File
File Size
Sequence Length
Overall Quality
Total Sequences
Biosample
4DNBSJ7YVGU1
Bio Replicate 1
Experiment
4DNEX67G6KWD
Tech Replicate 1
Pair 1
9.34 GB
101
  Pass
149.12m
7.45 GB
101
  Pass
149.12m
Pair 2
9 GB
101
  Pass
145.89m
7.13 GB
101
  Pass
145.89m
Pair 3
14.49 MB
28
  Pass
661.68k
35.5 MB
91
  Pass
661.68k
Pair 4
14.28 MB
28
  Pass
653.37k
34.81 MB
91
  Pass
653.37k
Pair 5
14.72 MB
28
  Pass
672.13k
35.85 MB
91
  Pass
672.13k
Pair 6
13.96 MB
28
  Pass
638.31k
33.99 MB
91
  Pass
638.31k