ExperimentSetReplicate

ExperimentSet4DNESGNDTO24
released

RNA-seq on primary motor cortex from Rhesus monkey - Dheni

   April 16th, 2024 at 3:23pm
Source Publication

Aggregated non-redundant peaks - NoRef  


NOTE Non-redundant peaks aggregated from multiple donors in bed format is provided as a supplementary file. As 4DN does not host the genome assembly for this organism, this bed file cannot be visualized using HiGlass tool. However, users can download HiGlass tool from here for visualization purposes. While visualizing file through HiGlass please note that peaks of a specific cell type are represented using different track colors. Additionally, a zipped folder containing individual bed files specific for each cell type is also provided. The information on track colors and associated cell type can be accessed via a key file here


Experiment Set Properties  


Set Type 
Replicate
Organism 
Sample Type 
tissue
Experiment Type(s) 
Modification Type 
None
Treatment Type 
None
Assay Details 
None

12 Raw Files

Biosample
Experiment
File
File Size
Sequence Length
Overall Quality
Total Sequences
Biosample
4DNBSE8I6S9X
Bio Replicate 1
Experiment
4DNEXKTQZF1C
Tech Replicate 1
Pair 1
22.49 GB
101
  Pass
361.89m
17.97 GB
101
  Pass
361.89m
Pair 2
6.01 GB
101
  Pass
96.91m
4.79 GB
101
  Pass
96.91m
Pair 3
19.93 MB
28
  Pass
917.4k
48.57 MB
91
  Pass
917.4k
Pair 4
19.79 MB
28
  Pass
913.44k
48.12 MB
91
  Pass
913.44k
Pair 5
20.26 MB
28
  Pass
933.48k
49.19 MB
91
  Pass
933.48k
Pair 6
19.27 MB
28
  Pass
888.09k
46.72 MB
91
  Pass
888.09k