ExperimentSet4DNESGD1VV1Z
released
January 22nd, 2021 at 12:35am
Data Usage Guidelines
Data Use Guidelines: This is a data set generated by the 4DN Network and made freely available to the scientific community. If you are intending to use these data for a publication, we ask that you please contact the data generating lab to discuss possible coordinated publication. In your manuscript, please cite the 4DN White Paper (doi:10.1038/nature23884) and the 4DN Data Portal paper (doi:10.1038/s41467-022-29697-4), and please acknowledge the 4DN lab which generated the data. Please direct any questions to the Data Coordination and Integration Center.
Experiment Set Properties
Set Type
Replicate
Organism
Sample Type
in vitro differentiated cells
Experiment Type(s)
Modification Type
None
Treatment Type
None
Assay Details
None
10 Processed Files
Quality Metrics
Experiment
For File
Total mapped reads (genome)
Total uniquely mapped reads (genome)
Details
Experiment
4DNEX9Q72VCF
Bio Rep 1, Tec Rep 1
RNA-seq on F121-9-CASTx129 (Tier 2) differentiated to epiblast cellExperiment
4DNEXVGXKJ2A
Bio Rep 2, Tec Rep 1
RNA-seq on F121-9-CASTx129 (Tier 2) differentiated to epiblast cellExperiment
For File
Reads mapped to protein-coding genes
Reads mapped to rRNA
Details
Experiment
4DNEX9Q72VCF
Bio Rep 1, Tec Rep 1
RNA-seq on F121-9-CASTx129 (Tier 2) differentiated to epiblast cellExperiment
4DNEXVGXKJ2A
Bio Rep 2, Tec Rep 1
RNA-seq on F121-9-CASTx129 (Tier 2) differentiated to epiblast cell