ExperimentSetReplicate

ExperimentSet4DNES94PCTI4
released
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RNA-seq on microdissected cerebellar lobule VI from mixed strain mouse postnatal day 56

   March 26th, 2022 at 10:33pm
Source Publication
Mega-Enhancer Bodies Organize Neuronal Long Genes in the Cerebellum.
Zhao Z, Parra OP, et al., bioRxiv : the preprint server for biology 2023

Experiment Set Properties  

Set Type 
Replicate
Organism 
M. musculus
Sample Type 
tissue
Sample 
cerebellum vermis lobule VI
Experiment Type(s) 
RNA-seq
Modification Type 
None
Treatment Type 
None
Assay Details 
None

20 Processed Files

Quality Metrics

Experiment
For File
Total mapped reads (genome)
Total uniquely mapped reads (genome)
Details
Experiment
4DNEXHWXL77U
Bio Rep 1, Tec Rep 1
RNA-seq on cerebellum vermis lobule VI
File
Read Positions (bam)
4DNFIL9OWPWV
25.66m
24.51m
Experiment
4DNEXM3OAYB6
Bio Rep 2, Tec Rep 1
RNA-seq on cerebellum vermis lobule VI
File
Read Positions (bam)
4DNFIHZY6D84
20.69m
19.55m
Experiment
4DNEXURSXS69
Bio Rep 3, Tec Rep 1
RNA-seq on cerebellum vermis lobule VI
File
Read Positions (bam)
4DNFIPV4G17C
20.26m
19.33m
Experiment
4DNEXGSXA11I
Bio Rep 4, Tec Rep 1
RNA-seq on cerebellum vermis lobule VI
File
Read Positions (bam)
4DNFIGDNP15X
20.49m
19.48m
Experiment
For File
Reads mapped to protein-coding genes
Reads mapped to rRNA
Details
Experiment
4DNEXHWXL77U
Bio Rep 1, Tec Rep 1
RNA-seq on cerebellum vermis lobule VI
File
Gene Expression (tsv)
4DNFIWMWIMQ9
15.02m
16.75k
Experiment
4DNEXM3OAYB6
Bio Rep 2, Tec Rep 1
RNA-seq on cerebellum vermis lobule VI
File
Gene Expression (tsv)
4DNFINIAS4XG
12.93m
16.85k
Experiment
4DNEXURSXS69
Bio Rep 3, Tec Rep 1
RNA-seq on cerebellum vermis lobule VI
File
Gene Expression (tsv)
4DNFI3CZB5SQ
11.07m
36.86k
Experiment
4DNEXGSXA11I
Bio Rep 4, Tec Rep 1
RNA-seq on cerebellum vermis lobule VI
File
Gene Expression (tsv)
4DNFI6Y7R6U9
11.74m
59.18k