ExperimentSetReplicate

ExperimentSet4DNES6UVXJ51
released

ATAC-seq on primary motor cortex from White-tufted-ear marmoset - Meadow

   April 12th, 2024 at 11:40pm
Source Publication

Aggregated non-redundant peaks - NoRef  


NOTE Non-redundant peaks aggregated from multiple donors in bed format is provided as a supplementary file. As 4DN does not host the genome assembly for this organism, this bed file cannot be visualized using HiGlass tool. However, users can download HiGlass tool from here for visualization purposes. While visualizing file through HiGlass please note that peaks of a specific cell type are represented using different track colors. Additionally, a zipped folder containing individual bed files specific for each cell type is also provided. The information on track colors and associated cell type can be accessed via a key file here


Experiment Set Properties  


Set Type 
Replicate
Organism 
Sample Type 
tissue
Experiment Type(s) 
Modification Type 
None
Treatment Type 
None
Assay Details 
None

9 Raw Files

Biosample
Experiment
File
File Size
Sequence Length
Overall Quality
Total Sequences
Biosample
4DNBS2ZW2A2L
Bio Replicate 1
Experiment
4DNEX4ADM3X7
Tech Replicate 1
Grp 1
20.19 GB
101
  Pass
425.57m
20.71 GB
101
  Pass
425.57m
6.65 GB
24
  Pass
425.57m
Grp 2
20.2 GB
101
  Pass
424.83m
20.71 GB
101
  Pass
424.83m
6.62 GB
24
  Pass
424.83m
Grp 3
20.51 GB
101
  Pass
430.63m
21.09 GB
101
  Pass
430.63m
6.74 GB
24
  Pass
430.63m