ExperimentSetReplicate

ExperimentSet4DNES4H61NGQ
released

RNA-seq on Peripheral blood mononuclear cells from MCG016

   October 24th, 2024 at 9:00pm

Data Usage Guidelines  


Data Use Guidelines: This is a data set generated by the 4DN Network and made freely available to the scientific community. If you are intending to use these data for a publication, we ask that you please contact the data generating lab to discuss possible coordinated publication. In your manuscript, please cite the 4DN White Paper (doi:10.1038/nature23884) and the 4DN Data Portal paper (doi:10.1038/s41467-022-29697-4), and please acknowledge the 4DN lab which generated the data. Please direct any questions to the Data Coordination and Integration Center.


Experiment Set Properties  


Set Type 
Replicate
Organism 
Sample Type 
primary cells
Experiment Type(s) 
Modification Type 
None
Treatment Type 
None
Assay Details 
None

10 Processed Files

Quality Metrics

Experiment
For File
Total mapped reads (genome)
Total uniquely mapped reads (genome)
Details
Experiment
4DNEX46ZUXG4
Bio Rep 1, Tec Rep 1
RNA-seq on MCG016 Peripheral blood mononuclear cells
File
Read Positions (bam)
4DNFIXT8I9AY
16.1m
13.94m
Experiment
4DNEXZV1XAH7
Bio Rep 1, Tec Rep 2
RNA-seq on MCG016 Peripheral blood mononuclear cells
File
Read Positions (bam)
4DNFISFL59LU
18.37m
16.36m
Experiment
For File
Reads mapped to protein-coding genes
Reads mapped to rRNA
Details
Experiment
4DNEX46ZUXG4
Bio Rep 1, Tec Rep 1
RNA-seq on MCG016 Peripheral blood mononuclear cells
File
Gene Expression (tsv)
4DNFID6H6Q5H
25.39m
2.46k
Experiment
4DNEXZV1XAH7
Bio Rep 1, Tec Rep 2
RNA-seq on MCG016 Peripheral blood mononuclear cells
File
Gene Expression (tsv)
4DNFITC4N2QP
28.42m
568