ExperimentSetReplicate

ExperimentSet4DNES26KMMA4
released
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RNA-seq on cerebellum from C57BL/6 mouse postnatal day 22

   March 26th, 2022 at 10:33pm
Source Publication
Mega-Enhancer Bodies Organize Neuronal Long Genes in the Cerebellum.
Zhao Z, Parra OP, et al., bioRxiv : the preprint server for biology 2023

Experiment Set Properties  

Set Type 
Replicate
Organism 
M. musculus
Sample Type 
tissue
Sample 
cerebellum - PND 22
Experiment Type(s) 
RNA-seq
Modification Type 
None
Treatment Type 
None
Assay Details 
None

20 Processed Files

Quality Metrics

Experiment
For File
Total mapped reads (genome)
Total uniquely mapped reads (genome)
Details
Experiment
4DNEX4CO28IL
Bio Rep 1, Tec Rep 1
RNA-seq on cerebellum - PND 22
File
Read Positions (bam)
4DNFI6H88R6E
24.97m
21m
Experiment
4DNEXUJ9STDT
Bio Rep 2, Tec Rep 1
RNA-seq on cerebellum - PND 22
File
Read Positions (bam)
4DNFIVAOJHA3
45.34m
38.27m
Experiment
4DNEXLVA8876
Bio Rep 3, Tec Rep 1
RNA-seq on cerebellum - PND 22
File
Read Positions (bam)
4DNFI9XND444
39.3m
33.68m
Experiment
4DNEXEEVCOQO
Bio Rep 4, Tec Rep 1
RNA-seq on cerebellum - PND 22
File
Read Positions (bam)
4DNFIBYUJOH2
34.85m
29.79m
Experiment
For File
Reads mapped to protein-coding genes
Reads mapped to rRNA
Details
Experiment
4DNEX4CO28IL
Bio Rep 1, Tec Rep 1
RNA-seq on cerebellum - PND 22
File
Gene Expression (tsv)
4DNFIVMKQHH6
7.62m
7.42m
Experiment
4DNEXUJ9STDT
Bio Rep 2, Tec Rep 1
RNA-seq on cerebellum - PND 22
File
Gene Expression (tsv)
4DNFIG76S3MY
13.7m
12.85m
Experiment
4DNEXLVA8876
Bio Rep 3, Tec Rep 1
RNA-seq on cerebellum - PND 22
File
Gene Expression (tsv)
4DNFIVYNBZ2S
12.14m
10.59m
Experiment
4DNEXEEVCOQO
Bio Rep 4, Tec Rep 1
RNA-seq on cerebellum - PND 22
File
Gene Expression (tsv)
4DNFIRHNWFON
10.84m
9.46m