Publications

 

Properties

Data Type
  • Publication8
    • Lab
    Journal
    Experiment Types
    Categories
  • technology development8
    • Status
    1 Common Properties
     Project
    4DN
    8 Results
    Title
    Year
    Journal
    Exp Sets
    Project
    TSA-seq reveals a largely conserved genome organization relative to nuclear speckles with small position changes tightly correlated with gene expression changes.
    Zhang LZhang YChen YGholamalamdari OWang YMa JBelmont AS
    2020
    Genome research
    58
    4DN
    Comprehensive single-cell transcriptional profiling of a multicellular organism.
    Cao JPacker JSRamani VCusanovich DAHuynh CDaza RQiu XLee CFurlan SNSteemers FJAdey AWaterston RHTrapnell CShendure J
    2017
    Science(New York, N.Y.)
    -
    4DN
    Multiplex single cell profiling of chromatin accessibility by combinatorial cellular indexing.
    Cusanovich DADaza RAdey APliner HAChristiansen LGunderson KLSteemers FJTrapnell CShendure J
    2015
    Science(New York, N.Y.)
    -
    4DN
    An Integrated Platform for High-Throughput Nanoscopy
    Barentine AESLin YCourvan EMKidd PLiu MBalduf LPhan TRivera-Molina FGrace MRMarin ZLessard MRios-Chen JWang SNeugebauer KMBewersdorf JBaddeley D
    2022
    bioRxiv
    5
    4DN
    A fluorogenic array for temporally unlimited single-molecule tracking.
    Ghosh RPFranklin JMDraper WEShi QBeltran BSpakowitz AJLiphardt JT
    2019
    Nature chemical biology
    -
    4DN
    MAPS: Model-based analysis of long-range chromatin interactions from PLAC-seq and HiChIP experiments.
    Juric IYu MAbnousi ARaviram RFang RZhao YZhang YQiu YYang YLi YRen BHu M
    2019
    PLoS computational biology
    2
    4DN
    Mapping 3D genome organization relative to nuclear compartments using TSA-Seq as a cytological ruler.
    Chen YZhang YWang YZhang LBrinkman EKAdam SAGoldman Rvan Steensel BMa JBelmont AS
    2018
    The Journal of cell biology
    28
    4DN
    Higher-Order Inter-chromosomal Hubs Shape 3D Genome Organization in the Nucleus.
    Quinodoz SAOllikainen NTabak BPalla ASchmidt JMDetmar ELai MMShishkin AABhat PTakei YTrinh VAznauryan ERussell PCheng CJovanovic MChow ACai LMcDonel PGarber MGuttman M
    2018
    Cell
    22
    4DN
    - fin -