Publications

Included Properties

Data Type
  • Publication9
    • Project
    Lab
    Journal
    Experiment Types
    Categories
  • methods paper9
    • Status
    9 Results
    Title
    Year
    Journal
    Exp Sets
    Project
    Cryomilling Tethered Chromatin Conformation Capture reveal new insights into inter-chromosomal interactions
    Xu JKumar SHua NKou YLei XRout MAitchison JAlber FChen L
    2022
    bioRxiv
    7
    4DN
    Capturing cell type-specific chromatin compartment patterns by applying topic modeling to single-cell Hi-C data.
    Kim HJYardimci GGBonora GRamani VLiu JQiu RLee CHesson JWare CBShendure JDuan ZNoble WS
    2020
    PLoS computational biology
    6
    4DN
    Spatiotemporal Control of Intracellular Phase Transitions Using Light-Activated optoDroplets.
    Shin YBerry JPannucci NHaataja MPToettcher JEBrangwynne CP
    2017
    Cell
    -
    4DN
    Sci-Hi-C: A single-cell Hi-C method for mapping 3D genome organization in large number of single cells.
    Ramani VDeng XQiu RLee CDisteche CMNoble WSShendure JDuan Z
    2020
    Methods(San Diego, Calif.)
    -
    4DN
    Allelic reprogramming of 3D chromatin architecture during early mammalian development.
    Du ZZheng HHuang BMa RWu JZhang XHe JXiang YWang QLi YMa JZhang XZhang KWang YZhang MQGao JDixon JRWang XZeng JXie W
    2017
    Nature
    18
    External
    Long-read ChIA-PET for base-pair-resolution mapping of haplotype-specific chromatin interactions.
    Li XLuo OJWang PZheng MWang DPiecuch EZhu JJTian SZTang ZLi GRuan Y
    2017
    Nature protocols
    -
    4DN
    Detection of in vivo protein-DNA interactions using DamID in mammalian cells.
    Vogel MJPeric-Hupkes Dvan Steensel B
    2007
    Nature protocols
    -
    External
    Chromatin position effects assayed by thousands of reporters integrated in parallel.
    Akhtar Wde Jong JPindyurin AVPagie LMeuleman Wde Ridder JBerns AWessels LFvan Lohuizen Mvan Steensel B
    2013
    Cell
    -
    External
    ATAC-seq: A Method for Assaying Chromatin Accessibility Genome-Wide.
    Buenrostro JDWu BChang HYGreenleaf WJ
    2015
    Current protocols in molecular biology
    -
    External
    - fin -