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Properties

Dataset
Organ/System
Assay Details
Set Type
Accession
Warnings
16 Common Properties
 Project
4DN
 Lab
David Gilbert, SDBRI
 Experiment Category
Sequencing
 Experiment Type
Multi-stage Repli-seq
 Organism
Human
 Sample Type
immortalized cells
 Sample Tier
Unclassified
 Sample Category
Tier 2
 Sample
HCT116 with Crispr generated mClover and AID-tagged RAD21
 Tissue Source
colon
 Publication
Daniel Emerson et al. (2021) doi:10.1101/2021.01.05.425437
 Modifications
No value
 Treatments
Chemical
 Center
NOFIC - Belmont
 Status
Released
 Commendations
No value
2 Results
Title
Set Type
Experiment Type
Biosample
Dataset
Condition
Assay Details
Lab
Replicate
Multi-stage Repli-seq
HCT116 with Crispr generated mClover and AID-tagged RAD21
16-fraction Repli-seq on Rad21 depleted HCT116
P15
Fraction
P15 of 16 fractions
Custom
Multi-stage Repli-seq
HCT116 with Crispr generated mClover and AID-tagged RAD21
Multi-fraction Repliseq on HCT116
CTCF depletion
Fraction
P2 of 16 fractions; P3 of 16 fractions; P4 of 16 fractions; P5 of 16 fractions; P6 of 16 fractions; P7 of 16 fractions; P8 of 16 fractions; P9 of 16 fractions; P10 of 16 fractions; P11 of 16 fractions; P12 of 16 fractions; P13 of 16 fractions; P14 of 16 fractions; P15 of 16 fractions; P16 of 16 fractions; P17 of 16 fractions
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