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Included Properties

Dataset
Organ/System
Assay Details
Set Type
Accession
Warnings
16 Common Properties
 Project
4DN
 Lab
David Gilbert, SDBRI
 Experiment Category
Sequencing
 Experiment Type
Replication timing
 Organism
Human
 Sample Type
immortalized cells
 Sample Tier
Unclassified
 Sample Category
Tier 2
 Sample
HCT116 with Crispr generated mClover and AID-tagged RAD21
 Tissue Source
colon
 Publication
Emerson DJ et al. (2022) PMID:35676475
 Modifications
No value
 Treatments
Chemical
 Center
NOFIC - Belmont
 Status
Released
 Commendations
No value
2 Results
Title
Set Type
Experiment Type
Biosample
Dataset
Condition
Assay Details
Lab
Replicate
Multi-stage Repli-seq
HCT116 with Crispr generated mClover and AID-tagged RAD21
16-fraction Repli-seq on Rad21 depleted HCT116
P14
Fraction
P14 of 16 fractions
Custom
Multi-stage Repli-seq
HCT116 with Crispr generated mClover and AID-tagged RAD21
Multi-fraction Repliseq on HCT116
CTCF depletion
Fraction
P2 of 16 fractions; P3 of 16 fractions; P4 of 16 fractions; P5 of 16 fractions; P6 of 16 fractions; P7 of 16 fractions; P8 of 16 fractions; P9 of 16 fractions; P10 of 16 fractions; P11 of 16 fractions; P12 of 16 fractions; P13 of 16 fractions; P14 of 16 fractions; P15 of 16 fractions; P16 of 16 fractions; P17 of 16 fractions
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