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  • 4DN53
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    53 Results
    Title
    Year
    Journal
    Exp Sets
    Project
    Distinct Classes of Chromatin Loops Revealed by Deletion of an RNA-Binding Region in CTCF.
    Hansen ASHsieh TSCattoglio CPustova ISaldana-Meyer RReinberg DDarzacq XTjian R
    2019
    Molecular cell
    2
    4DN
    Common DNA sequence variation influences 3-dimensional conformation of the human genome.
    Gorkin DUQiu YHu MFletez-Brant KLiu TSchmitt ADNoor AChiou JGaulton KJSebat JLi YHansen KDRen B
    2019
    Genome biology
    19
    4DN
    Multiplex chromatin interactions with single-molecule precision.
    Zheng MTian SZCapurso DKim MMaurya RLee BPiecuch EGong LZhu JJLi ZWong CHNgan CYWang PRuan XWei CLRuan Y
    2019
    Nature
    -
    4DN
    Long-read ChIA-PET for base-pair-resolution mapping of haplotype-specific chromatin interactions.
    Li XLuo OJWang PZheng MWang DPiecuch EZhu JJTian SZTang ZLi GRuan Y
    2017
    Nature protocols
    -
    4DN
    A chromosome folding intermediate at the condensin-to-cohesin transition during telophase.
    Abramo KValton ALVenev SVOzadam HFox ANDekker J
    2019
    Nature cell biology
    194
    4DN
    Diverse Spatial Expression Patterns Emerge from Unified Kinetics of Transcriptional Bursting.
    Zoller BLittle SCGregor T
    2018
    Cell
    6
    4DN
    TSA-Seq 2.0 reveals both conserved and variable chromosomal distances to nuclear speckles
    Liguo ZhangYang ZhangYu ChenOmid GholamalamdariJian MaAndrew S. Belmont
    2019
    bioRxiv
    27
    4DN
    Compartment-dependent chromatin interaction dynamics revealed by liquid chromatin Hi-C
    Houda BelaghzalTyler BorrmanAndrew D. StephensDenis L. LafontaineSergey V. VenevZhiping WengJohn F. MarkoJob Dekker
    2019
    bioRxiv
    19
    4DN
    Identifying cis Elements for Spatiotemporal Control of Mammalian DNA Replication.
    Sima JChakraborty ADileep VMichalski MKlein KNHolcomb NPTurner JLPaulsen MTRivera-Mulia JCTrevilla-Garcia CBartlett DAZhao PAWashburn BKNora EPKraft KMundlos SBruneau BGLjungman MFraser PAy FGilbert DM
    2019
    Cell
    9
    4DN
    Joint profiling of DNA methylation and chromatin architecture in single cells.
    Li GLiu YZhang YKubo NYu MFang RKellis MRen B
    2019
    Nature methods
    -
    4DN
    Chromatin conformation remains stable upon extensive transcriptional changes driven by heat shock.
    Ray JMunn PRVihervaara ALewis JJOzer ADanko CGLis JT
    2019
    Proceedings of the National Academy of Sciences of the Unite...
    4
    4DN
    3D Chromatin Architecture Remodeling during Human Cardiomyocyte Differentiation Reveals A Role Of HERV-H In Demarcating Chromatin Domains
    Yanxiao ZhangTing LiSebastian PreisslJonathan GrinsteinElie FarahEugin DesticiAh Young LeeSora CheeYunjiang QiuKaiyue MaZhen YeQuan ZhuHui HuangRong HuRongxin FangLeqian YuJuan Carlos BelmonteJun WuSylvia Evanset al.
    2019
    bioRxiv
    6
    4DN
    Distinct features of nucleolus-associated domains in mouse embryonic stem cells
    Aizhan BizhanovaAimin YanJun YuLihua Julie ZhuPaul D. Kaufman
    2019
    bioRxiv
    12
    4DN
    Chromatin compartment dynamics in a haploinsufficient model of cardiac laminopathy.
    Bertero AFields PASmith ASTLeonard ABeussman KSniadecki NJKim DHTse HFPabon LShendure JNoble WSMurry CE
    2019
    The Journal of cell biology
    6
    4DN
    3D Multicolor Nanoscopy at 10,000 Cells a Day
    Andrew E S BarentineYu LinMiao LiuPhylicia KiddLeonhard BaldufMichael R GraceSiyuan WangJoerg BewersdorfDavid Baddeley
    2019
    bioRxiv
    5
    4DN
    Promoter-Intrinsic and Local Chromatin Features Determine Gene Repression in LADs.
    Leemans Cvan der Zwalm MCHBrueckner LComoglio Fvan Schaik TPagie Lvan Arensbergen Jvan Steensel B
    2019
    Cell
    7
    4DN
    Dynamics of genome reorganization during human cardiogenesis reveal an RBM20-dependent splicing factory.
    Bertero AFields PARamani VBonora GYardimci GGReinecke HPabon LNoble WSShendure JMurry CE
    2019
    Nature communications
    18
    4DN
    A fluorogenic array for temporally unlimited single-molecule tracking.
    Ghosh RPFranklin JMDraper WEShi QBeltran BSpakowitz AJLiphardt JT
    2019
    Nature chemical biology
    -
    4DN
    Two contrasting classes of nucleolus-associated domains in mouse fibroblast heterochromatin.
    Vertii AOu JYu JYan APages HLiu HZhu LJKaufman PD
    2019
    Genome research
    6
    4DN
    Trac-looping measures genome structure and chromatin accessibility.
    Lai BTang QJin WHu GWangsa DCui KStanton BZRen GDing YZhao MLiu SSong JRied TZhao K
    2018
    Nature methods
    -
    4DN
    ChromEMT: Visualizing 3D chromatin structure and compaction in interphase and mitotic cells.
    Ou HDPhan SDeerinck TJThor AEllisman MHO'Shea CC
    2017
    Science(New York, N.Y.)
    3
    4DN
    Resolving the 3D landscape of transcription-linked mammalian chromatin folding
    Tsung-Han S. HsiehElena SlobodyanyukAnders S. HansenClaudia CattoglioOliver J. RandoRobert TjianXavier Darzacq
    2019
    bioRxiv
    3
    4DN
    Specific Virus-Host Genome Interactions Revealed by Tethered Chromosome Conformation Capture
    Haochen LiReza KalhorBing LiTrent SuArnold J. BerkSiavash K. KurdistaniFrank AlberLin Chen
    2017
    bioRxiv
    4
    4DN
    LHX2- and LDB1-mediated trans interactions regulate olfactory receptor choice.
    Monahan KHorta ALomvardas S
    2019
    Nature
    7
    4DN
    Ultrastructural details of mammalian chromosome architecture
    Nils KrietensteinSameer AbrahamSergey V. VenevNezar AbdennurJohan GibcusTsung-Han S. HsiehKrishna Mohan ParsiLiyan YangRen MaehrLeonid A. MirnyJob DekkerOliver J. Rando
    2019
    bioRxiv
    4
    4DN