Publications

53 Results
Title
Year
Journal
Exp Sets
Project
Distinct Classes of Chromatin Loops Revealed by Deletion of an RNA-Binding Region in CTCF.
Hansen ASHsieh TSCattoglio CPustova ISaldana-Meyer RReinberg DDarzacq XTjian R
2019
Molecular cell
2
4DN
Common DNA sequence variation influences 3-dimensional conformation of the human genome.
Gorkin DUQiu YHu MFletez-Brant KLiu TSchmitt ADNoor AChiou JGaulton KJSebat JLi YHansen KDRen B
2019
Genome biology
19
4DN
Multiplex chromatin interactions with single-molecule precision.
Zheng MTian SZCapurso DKim MMaurya RLee BPiecuch EGong LZhu JJLi ZWong CHNgan CYWang PRuan XWei CLRuan Y
2019
Nature
-
4DN
Long-read ChIA-PET for base-pair-resolution mapping of haplotype-specific chromatin interactions.
Li XLuo OJWang PZheng MWang DPiecuch EZhu JJTian SZTang ZLi GRuan Y
2017
Nature protocols
-
4DN
2019
Nature cell biology
194
4DN
TSA-Seq 2.0 reveals both conserved and variable chromosomal distances to nuclear speckles
Liguo ZhangYang ZhangYu ChenOmid GholamalamdariJian MaAndrew S. Belmont
2019
bioRxiv
27
4DN
Compartment-dependent chromatin interaction dynamics revealed by liquid chromatin Hi-C
Houda BelaghzalTyler BorrmanAndrew D. StephensDenis L. LafontaineSergey V. VenevZhiping WengJohn F. MarkoJob Dekker
2019
bioRxiv
19
4DN
Identifying cis Elements for Spatiotemporal Control of Mammalian DNA Replication.
Sima JChakraborty ADileep VMichalski MKlein KNHolcomb NPTurner JLPaulsen MTRivera-Mulia JCTrevilla-Garcia CBartlett DAZhao PAWashburn BKNora EPKraft KMundlos SBruneau BGLjungman MFraser PAy FGilbert DM
2019
Cell
9
4DN
2019
Nature methods
-
4DN
2019
Proceedings of the National Academy of Sciences of the Unite...
4
4DN
3D Chromatin Architecture Remodeling during Human Cardiomyocyte Differentiation Reveals A Role Of HERV-H In Demarcating Chromatin Domains
Yanxiao ZhangTing LiSebastian PreisslJonathan GrinsteinElie FarahEugin DesticiAh Young LeeSora CheeYunjiang QiuKaiyue MaZhen YeQuan ZhuHui HuangRong HuRongxin FangLeqian YuJuan Carlos BelmonteJun WuSylvia Evanset al.
2019
bioRxiv
6
4DN
Distinct features of nucleolus-associated domains in mouse embryonic stem cells
Aizhan BizhanovaAimin YanJun YuLihua Julie ZhuPaul D. Kaufman
2019
bioRxiv
12
4DN
Chromatin compartment dynamics in a haploinsufficient model of cardiac laminopathy.
Bertero AFields PASmith ASTLeonard ABeussman KSniadecki NJKim DHTse HFPabon LShendure JNoble WSMurry CE
2019
The Journal of cell biology
6
4DN
3D Multicolor Nanoscopy at 10,000 Cells a Day
Andrew E S BarentineYu LinMiao LiuPhylicia KiddLeonhard BaldufMichael R GraceSiyuan WangJoerg BewersdorfDavid Baddeley
2019
bioRxiv
5
4DN
Promoter-Intrinsic and Local Chromatin Features Determine Gene Repression in LADs.
Leemans Cvan der Zwalm MCHBrueckner LComoglio Fvan Schaik TPagie Lvan Arensbergen Jvan Steensel B
2019
Cell
7
4DN
Dynamics of genome reorganization during human cardiogenesis reveal an RBM20-dependent splicing factory.
Bertero AFields PARamani VBonora GYardimci GGReinecke HPabon LNoble WSShendure JMurry CE
2019
Nature communications
18
4DN
A fluorogenic array for temporally unlimited single-molecule tracking.
Ghosh RPFranklin JMDraper WEShi QBeltran BSpakowitz AJLiphardt JT
2019
Nature chemical biology
-
4DN
2019
Genome research
6
4DN
Trac-looping measures genome structure and chromatin accessibility.
Lai BTang QJin WHu GWangsa DCui KStanton BZRen GDing YZhao MLiu SSong JRied TZhao K
2018
Nature methods
-
4DN
2017
Science(New York, N.Y.)
3
4DN
Resolving the 3D landscape of transcription-linked mammalian chromatin folding
Tsung-Han S. HsiehElena SlobodyanyukAnders S. HansenClaudia CattoglioOliver J. RandoRobert TjianXavier Darzacq
2019
bioRxiv
3
4DN
Specific Virus-Host Genome Interactions Revealed by Tethered Chromosome Conformation Capture
Haochen LiReza KalhorBing LiTrent SuArnold J. BerkSiavash K. KurdistaniFrank AlberLin Chen
2017
bioRxiv
4
4DN
Ultrastructural details of mammalian chromosome architecture
Nils KrietensteinSameer AbrahamSergey V. VenevNezar AbdennurJohan GibcusTsung-Han S. HsiehKrishna Mohan ParsiLiyan YangRen MaehrLeonid A. MirnyJob DekkerOliver J. Rando
2019
bioRxiv
4
4DN