{"lab": {"title": "Rafael Casellas, NIH", "status": "current", "uuid": "ce54a7f7-af8a-4505-8327-e430634f494b", "correspondence": [{"contact_email": "Y2FzZWxsYXJAbWFpbC5uaWguZ292", "@id": "/users/68b09572-0c3e-48c7-90a9-7bad21d6bac1/", "display_title": "Rafael Casellas"}], "@type": ["Lab", "Item"], "display_title": "Rafael Casellas, NIH", "@id": "/labs/rafael-casellas-lab/", "pi": {"error": "no view permissions"}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin", "role.lab_submitter", "submits_for.ce54a7f7-af8a-4505-8327-e430634f494b"]}}, "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIOS8419Aqc_report.html", "desc": "", "name": "", "award": {"display_title": "EXTERNAL AWARD", "uuid": "12a92962-8265-4fc0-b2f8-cf14f05db58b", "status": "current", "center": "External", "@id": "/awards/external-award/", "project": "External", "@type": ["Award", "Item"], "description": "Funding source is from outside 4DN.", "name": "external-award", "center_title": "External", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "status": "released", "xcor_score": [{"NSC": 1.862683, "RSC": 1.440736, "min_corr": 0.1906634, "num_reads": 15000000, "argmin_corr": 1500, "est_frag_len": 230, "phantom_peak": 55, "corr_est_frag_len": 0.355145411652153, "corr_phantom_peak": 0.3048287}], "frip_spp_qc": {"rep1": {"FRiP": 0.328200745775}, "rep1-pr1": {"FRiP": 0.337280998541}, "rep1-pr2": {"FRiP": 0.337320622315}}, "idr_frip_qc": {"rep1-pr": {"FRiP": 0.206823331309}}, "date_created": "2019-06-18T22:35:14.835585+00:00", "submitted_by": {"error": "no view permissions"}, "frip_macs2_qc": {"rep1": {"FRiP": 0.233221068981}}, "last_modified": {"modified_by": {"error": "no view permissions"}, "date_modified": "2021-04-08T19:20:16.409402+00:00"}, "public_release": "2019-12-02", "schema_version": "1", "overlap_frip_qc": {"rep1-pr": {"FRiP": 0.239678435469}}, "project_release": "2019-12-02", "contributing_labs": [{"display_title": "4DN DCIC, HMS", "uuid": "828cd4fe-ebb0-4b36-a94a-d2e3a36cc989", "correspondence": [{"contact_email": "cGV0ZXJfcGFya0BobXMuaGFydmFyZC5lZHU=", "@id": "/users/fb287a31-e765-41c5-8c1d-665f8e9f025b/", "display_title": "Peter Park"}], "status": "current", "@id": "/labs/4dn-dcic-lab/", "@type": ["Lab", "Item"], "pi": {"error": "no view permissions"}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin", "role.lab_submitter", "submits_for.828cd4fe-ebb0-4b36-a94a-d2e3a36cc989"]}}], "idr_reproducibility_qc": {"N1": 26424, "Np": 0, "Nt": 0, "N_opt": 26424, "N_consv": 26424, "opt_set": "rep1-pr", "consv_set": "rep1-pr", "rescue_ratio": 0.0, "reproducibility": "pass", "self_consistency_ratio": 1.0}, "overall_quality_status": "PASS", "overlap_reproducibility_qc": {"N1": 87184, "Np": 0, "Nt": 0, "N_opt": 87184, "N_consv": 87184, "opt_set": "rep1-pr", "consv_set": "rep1-pr", "rescue_ratio": 0.0, "reproducibility": "pass", "self_consistency_ratio": 1.0}, "@id": "/quality-metrics-chipseq/2a7845f8-7dc5-4c14-bb99-ac9d7f32dd4d/", "@type": ["QualityMetricChipseq", "QualityMetric", "Item"], "uuid": "2a7845f8-7dc5-4c14-bb99-ac9d7f32dd4d", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "display_title": "QualityMetricChipseq from 2019-06-18", "external_references": [], "quality_metric_summary": [{"title": "Optimal Peaks", "value": "26424", "numberType": "integer"}, {"title": "Rescue Ratio", "tooltip": "Ratio of number of peaks (Nt) relative to peak calling based on psuedoreplicates (Np) [max(Np,Nt) / min (Np,Nt)]", "value": "0.0", "numberType": "float"}, {"title": "Self Consistency Ratio", "tooltip": "Ratio of number of peaks in two replicates [max(N1,N2) / min (N1,N2)]", "value": "1.0", "numberType": "float"}, {"title": "Fraction of Reads in Peaks", "value": "0.21", "numberType": "float"}], "@context": "/terms/", "aggregated-items": {}, "validation-errors": []}