{"lab": {"title": "Wei Xie, TSINGHUA", "@id": "/labs/wei-xie-lab/", "@type": ["Lab", "Item"], "display_title": "Wei Xie, TSINGHUA", "status": "current", "uuid": "8c95312f-afa0-49ee-9d3c-e30849c74e50", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin", "role.lab_submitter", "submits_for.8c95312f-afa0-49ee-9d3c-e30849c74e50"]}}, "award": {"name": "external-award", "center_title": "External", "status": "current", "@type": ["Award", "Item"], "center": "External", "description": "Funding source is from outside 4DN.", "@id": "/awards/external-award/", "display_title": "EXTERNAL AWARD", "project": "External", "uuid": "12a92962-8265-4fc0-b2f8-cf14f05db58b", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "md5sum": "b5e72378c036f593ba09d8d54ae54ab2", "status": "released", "accession": "4DNFIU7DL977", "file_size": 1292186660, "file_type": "contact list-replicate", "description": "This is an output file of the Hi-C processing pipeline", "extra_files": [{"href": "/files-processed/4DNFIU7DL977/@@download/4DNFIU7DL977.pairs.gz.px2", "uuid": "670423d8-0688-4389-9761-52f99ab769eb", "md5sum": "0146b6fcd138ba49b0bd1d3e9d50c616", "status": "released", "filename": "4DNFIU7DL977", "accession": "4DNFIU7DL977", "file_size": 17665674, "upload_key": "670423d8-0688-4389-9761-52f99ab769eb/4DNFIU7DL977.pairs.gz.px2", "file_format": {"@type": ["FileFormat", "Item"], "display_title": "pairs_px2", "status": "released", "@id": "/file-formats/pairs_px2/", "uuid": "d13d06cf-218e-4f61-aaf0-91f226348b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"@type": ["FileFormat", "Item"], "uuid": "d13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/pairs/", "status": "released", "display_title": "pairs", "file_format": "pairs", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "date_created": "2020-01-24T06:01:13.715496+00:00", "submitted_by": {"error": "no view permissions"}, "last_modified": {"modified_by": {"error": "no view permissions"}, "date_modified": "2021-04-06T20:19:01.583036+00:00"}, "public_release": "2020-02-07", "quality_metric": {"@id": "/quality-metrics-pairsqc/ab45c2f1-0204-4bc6-8311-4c608fb1c7ab/", "Trans reads": 29038776, "@type": ["QualityMetricPairsqc", "QualityMetric", "Item"], "display_title": "QualityMetricPairsqc from 2020-01-24", "Cis reads (>20kb)": 34063474, "uuid": "ab45c2f1-0204-4bc6-8311-4c608fb1c7ab", "status": "released", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIU7DL977/pairsqc_report.html", "Total reads": 83522736, "Short cis reads (<20kb)": 20420486, "quality_metric_summary": [{"title": "Filtered Reads", "value": "83522736", "numberType": "integer"}, {"title": "Cis reads (>20kb)", "value": "40.783", "tooltip": "Percent of filtered reads (=34.06m)", "numberType": "percent"}, {"title": "Short cis reads", "value": "24.449", "tooltip": "Percent of filtered reads (=20.42m)", "numberType": "percent"}, {"title": "Trans Reads", "value": "34.768", "tooltip": "Percent of filtered reads (=29.04m)", "numberType": "percent"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "schema_version": "3", "genome_assembly": "GRCm38", "project_release": "2020-02-07", "source_experiments": ["adff3ed9-5d76-42f1-afbe-0f22cb43c300"], "file_classification": "processed file", "@id": "/files-processed/4DNFIU7DL977/", "@type": ["FileProcessed", "File", "Item"], "uuid": "670423d8-0688-4389-9761-52f99ab769eb", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "display_title": "4DNFIU7DL977.pairs.gz", "external_references": [], "experiments": [{"accession": "4DNEX4U1GKC1", "display_title": "in situ Hi-C on Late 2-cell stage embryo with MboI - 4DNEX4U1GKC1", "status": "released", "@id": "/experiments-hi-c/4DNEX4U1GKC1/", "@type": ["ExperimentHiC", "Experiment", "Item"], "uuid": "adff3ed9-5d76-42f1-afbe-0f22cb43c300", "biosample": {"uuid": "bcbb49ad-6ab0-4804-98e1-f60ab89201c6", "status": "released", "display_title": "4DNBSAD3ZHNH", "@type": ["Biosample", "Item"], "@id": "/biosamples/4DNBSAD3ZHNH/", "accession": "4DNBSAD3ZHNH", "modifications_summary": "None", "biosource_summary": "Late 2-cell stage embryo", "treatments_summary": "None", "biosource": [{"biosource_type": "tissue", "@type": ["Biosource", "Item"], "uuid": "7be713aa-2c2f-4620-a6b9-7d29ac704618", "override_biosource_name": "Late 2-cell stage embryo", "display_title": "Late 2-cell stage embryo - 4DNSRMXCYI1V", "status": "released", "cell_line_tier": "Unclassified", "@id": "/biosources/4DNSRMXCYI1V/", "individual": {"@id": "/individuals-mouse/4DNINNKVDPKM/", "display_title": "4DNINNKVDPKM", "uuid": "15556aef-771d-4338-9ed9-6cc0be87a0ea", "status": "released", "@type": ["IndividualMouse", "Individual", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "tissue": {"term_id": "UBERON:0019249", "status": "released", "@id": "/ontology-terms/UBERON:0019249/", "term_name": "2-cell stage embryo", "preferred_name": "2-cell stage embryo", "display_title": "2-cell stage embryo", "@type": ["OntologyTerm", "Item"], "uuid": "8f120a42-adbd-4f4c-b6fb-a96289124767", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "organism": {"@id": "/organisms/10090/", "@type": ["Organism", "Item"], "uuid": "3413218c-3d86-498b-a0a2-9a406638e786", "scientific_name": "Mus musculus", "display_title": "M. musculus", "name": "mouse", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "experiment_sets": [{"accession": "4DNESXZHIUAU", "uuid": "483d941f-bcd9-4fef-a7e0-9d3e2f1c215d", "experimentset_type": "replicate", "status": "released", "@type": ["ExperimentSetReplicate", "ExperimentSet", "Item"], "@id": "/experiment-set-replicates/4DNESXZHIUAU/", "display_title": "4DNESXZHIUAU", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}], "experiment_type": {"@id": "/experiment-types/in-situ-hi-c/", "uuid": "a2920a38-cdba-4ff0-b4f0-c6bb53257747", "status": "released", "@type": ["ExperimentType", "Item"], "display_title": "in situ Hi-C", "title": "in situ Hi-C", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "digestion_enzyme": {"display_title": "MboI", "@id": "/enzymes/MboI/", "name": "MboI", "uuid": "d8da42d0-bc20-40e5-bacf-c263b8603e03", "@type": ["Enzyme", "Item"], "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "last_modified": {"date_modified": "2024-07-19T12:45:12.403796+00:00"}}], "file_type_detailed": "contact list-replicate (pairs)", "track_and_facet_info": {"experimental_lab": "Wei Xie, TSINGHUA", "experiment_type": "in situ Hi-C", "experiment_bucket": "processed file", "assay_info": "MboI", "dataset": "sisHi-C during early embryonic development", "condition": "Late 2-cell embryos", "replicate_info": "Biorep 3, Techrep 1", "biosource_name": "Late 2-cell stage embryo", "lab_name": "Wei Xie, TSINGHUA"}, "title": "4DNFIU7DL977", "href": "/files-processed/4DNFIU7DL977/@@download/4DNFIU7DL977.pairs.gz", "upload_key": "670423d8-0688-4389-9761-52f99ab769eb/4DNFIU7DL977.pairs.gz", "open_data_url": "https://4dn-open-data-public.s3.amazonaws.com/fourfront-webprod/wfoutput/670423d8-0688-4389-9761-52f99ab769eb/4DNFIU7DL977.pairs.gz", "tsv_notes": "", "workflow_run_inputs": [{"display_title": "hi-c-processing-pairs 0.2.7 run 2020-01-24 21:01:57.787374", "status": "released", "@type": ["WorkflowRunAwsem", "WorkflowRun", "Item"], "uuid": "2a95e024-a446-4ba4-a2ec-32e4d027ebda", "@id": "/workflow-runs-awsem/2a95e024-a446-4ba4-a2ec-32e4d027ebda/", "workflow": {"@type": ["Workflow", "Item"], "status": "released", "uuid": "23bd6d73-4190-496d-837c-21bcdb3802ed", "display_title": "Generation of multiresolution Hi-C contact matrices from a set of contact lists 0.2.7 - 4DNWF2YBHXQM", "@id": "/workflows/4DNWF2YBHXQM/", "title": "Generation of multiresolution Hi-C contact matrices from a set of contact lists 0.2.7", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "output_files": [{"workflow_argument_name": "merged_pairs", "value": {"display_title": "4DNFIFLS1BSB.pairs.gz", "@type": ["FileProcessed", "File", "Item"], "accession": "4DNFIFLS1BSB", "status": "released", "@id": "/files-processed/4DNFIFLS1BSB/", "uuid": "64417803-2951-46c8-abb7-907b5dac9d8d", "file_format": {"uuid": "d13d06cf-218e-4f61-aaf0-91f226248b2c", "file_format": "pairs", "@id": "/file-formats/pairs/", "@type": ["FileFormat", "Item"], "display_title": "pairs", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}, {"workflow_argument_name": "hic", "value": {"display_title": "4DNFICXCFGEI.hic", "@type": ["FileProcessed", "File", "Item"], "accession": "4DNFICXCFGEI", "status": "released", "@id": "/files-processed/4DNFICXCFGEI/", "uuid": "cc2b78fd-52d4-4e0c-ac93-b84ee82daf7e", "file_format": {"uuid": "d13d11cf-218e-4f61-bbf0-91f226248b2c", "file_format": "hic", "@id": "/file-formats/hic/", "@type": ["FileFormat", "Item"], "display_title": "hic", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}, {"workflow_argument_name": "mcool", "value": {"display_title": "4DNFIIWW8LIF.mcool", "@type": ["FileProcessed", "File", "Item"], "accession": "4DNFIIWW8LIF", "status": "released", "@id": "/files-processed/4DNFIIWW8LIF/", "uuid": "c04ceae2-51ac-4f7c-a7a1-1d401486e445", "file_format": {"uuid": "d13d06cf-218e-4f61-ccf0-91f226248b2c", "file_format": "mcool", "@id": "/file-formats/mcool/", "@type": ["FileFormat", "Item"], "display_title": "mcool", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "input_files": [{"workflow_argument_name": "chromsizes", "value": {"status": "released", "uuid": "bd0784a5-2a3d-42f0-ba9c-d9b3dc0539c6", "@type": ["FileReference", "File", "Item"], "display_title": "4DNFI3UBJ3HZ.chrom.sizes", "accession": "4DNFI3UBJ3HZ", "filename": "mm10.mainonly.chrom.sizes", "@id": "/files-reference/4DNFI3UBJ3HZ/", "file_format": {"@type": ["FileFormat", "Item"], "display_title": "chromsizes", "file_format": "chromsizes", "status": "released", "@id": "/file-formats/chromsizes/", "uuid": "d13d06cf-218e-4f61-55f0-93f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}, {"workflow_argument_name": "input_pairs", "value": {"status": "released", "uuid": "49ad7ee9-4933-4bb1-8edd-49006401f6d2", "@type": ["FileProcessed", "File", "Item"], "display_title": "4DNFIPLGJJ91.pairs.gz", "accession": "4DNFIPLGJJ91", "@id": "/files-processed/4DNFIPLGJJ91/", "file_format": {"@type": ["FileFormat", "Item"], "display_title": "pairs", "file_format": "pairs", "status": "released", "@id": "/file-formats/pairs/", "uuid": "d13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}, {"workflow_argument_name": "input_pairs", "value": {"status": "released", "uuid": "4af9078e-e256-4c42-986b-f938e34bc711", "@type": ["FileProcessed", "File", "Item"], "display_title": "4DNFI1JB7E6J.pairs.gz", "accession": "4DNFI1JB7E6J", "@id": "/files-processed/4DNFI1JB7E6J/", "file_format": {"@type": ["FileFormat", "Item"], "display_title": "pairs", "file_format": "pairs", "status": "released", "@id": "/file-formats/pairs/", "uuid": "d13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}, {"workflow_argument_name": "input_pairs", "value": {"status": "released", "uuid": "670423d8-0688-4389-9761-52f99ab769eb", "@type": ["FileProcessed", "File", "Item"], "display_title": "4DNFIU7DL977.pairs.gz", "accession": "4DNFIU7DL977", "@id": "/files-processed/4DNFIU7DL977/", "file_format": {"@type": ["FileFormat", "Item"], "display_title": "pairs", "file_format": "pairs", "status": "released", "@id": "/file-formats/pairs/", "uuid": "d13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}, {"workflow_argument_name": "input_pairs", "value": {"status": "released", "uuid": "6f63acdf-5055-40f0-a657-741bc9925dad", "@type": ["FileProcessed", "File", "Item"], "display_title": "4DNFILEFNUZY.pairs.gz", "accession": "4DNFILEFNUZY", "@id": "/files-processed/4DNFILEFNUZY/", "file_format": {"@type": ["FileFormat", "Item"], "display_title": "pairs", "file_format": "pairs", "status": "released", "@id": "/file-formats/pairs/", "uuid": "d13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}, {"workflow_argument_name": "restriction_file", "value": {"status": "released", "uuid": "cb3c293b-b5fe-4f47-9373-a29399ea1edc", "@type": ["FileReference", "File", "Item"], "display_title": "4DNFIONK4G14.txt", "accession": "4DNFIONK4G14", "filename": "mm10_MboI.txt", "@id": "/files-reference/4DNFIONK4G14/", "file_format": {"@type": ["FileFormat", "Item"], "display_title": "juicer_format_restriction_site_file", "file_format": "juicer_format_restriction_site_file", "status": "released", "@id": "/file-formats/juicer_format_restriction_site_file/", "uuid": "d13d06cf-218e-4f61-55f0-94f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"display_title": "pairsqc-single 0.2.6 run 2020-01-24 21:01:29.560819", "status": "released", "@type": ["WorkflowRunAwsem", "WorkflowRun", "Item"], "uuid": "c57e4783-882f-464b-85d1-b53232fd2f6e", "@id": "/workflow-runs-awsem/c57e4783-882f-464b-85d1-b53232fd2f6e/", "workflow": {"@type": ["Workflow", "Item"], "status": "released", "uuid": "b8c533e0-f8c0-4510-b4a1-ac35158e27c3", "display_title": "PairsQC 0.2.6 - 4DNWFHB26CID", "@id": "/workflows/4DNWFHB26CID/", "title": "PairsQC 0.2.6", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "output_files": [{"workflow_argument_name": "report", "value_qc": {"uuid": "ab45c2f1-0204-4bc6-8311-4c608fb1c7ab", "@type": ["QualityMetricPairsqc", "QualityMetric", "Item"], "display_title": "QualityMetricPairsqc from 2020-01-24", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIU7DL977/pairsqc_report.html", "status": "released", "overall_quality_status": "PASS", "@id": "/quality-metrics-pairsqc/ab45c2f1-0204-4bc6-8311-4c608fb1c7ab/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "input_files": [{"workflow_argument_name": "chromsizes", "value": {"status": "released", "uuid": "bd0784a5-2a3d-42f0-ba9c-d9b3dc0539c6", "@type": ["FileReference", "File", "Item"], "display_title": "4DNFI3UBJ3HZ.chrom.sizes", "accession": "4DNFI3UBJ3HZ", "filename": "mm10.mainonly.chrom.sizes", "@id": "/files-reference/4DNFI3UBJ3HZ/", "file_format": {"@type": ["FileFormat", "Item"], "display_title": "chromsizes", "file_format": "chromsizes", "status": "released", "@id": "/file-formats/chromsizes/", "uuid": "d13d06cf-218e-4f61-55f0-93f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}, {"workflow_argument_name": "input_pairs", "value": {"status": "released", "uuid": "670423d8-0688-4389-9761-52f99ab769eb", "@type": ["FileProcessed", "File", "Item"], "display_title": "4DNFIU7DL977.pairs.gz", "accession": "4DNFIU7DL977", "@id": "/files-processed/4DNFIU7DL977/", "file_format": {"@type": ["FileFormat", "Item"], "display_title": "pairs", "file_format": "pairs", "status": "released", "@id": "/file-formats/pairs/", "uuid": "d13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}], "workflow_run_outputs": [{"uuid": "2ac47666-4b2d-4546-aa3c-82263d2ec562", "@type": ["WorkflowRunAwsem", "WorkflowRun", "Item"], "display_title": "hi-c-processing-bam 0.2.6 run 2020-01-24 06:01:15.145432", "@id": "/workflow-runs-awsem/2ac47666-4b2d-4546-aa3c-82263d2ec562/", "status": "released", "input_files": [{"workflow_argument_name": "chromsize", "value": {"display_title": "4DNFI3UBJ3HZ.chrom.sizes", "@id": "/files-reference/4DNFI3UBJ3HZ/", "@type": ["FileReference", "File", "Item"], "accession": "4DNFI3UBJ3HZ", "status": "released", "uuid": "bd0784a5-2a3d-42f0-ba9c-d9b3dc0539c6", "filename": "mm10.mainonly.chrom.sizes", "file_format": {"file_format": "chromsizes", "@id": "/file-formats/chromsizes/", "@type": ["FileFormat", "Item"], "uuid": "d13d06cf-218e-4f61-55f0-93f226248b2c", "status": "released", "display_title": "chromsizes", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}, {"workflow_argument_name": "input_bams", "value": {"display_title": "4DNFI1UJ5ITJ.bam", "@id": "/files-processed/4DNFI1UJ5ITJ/", "@type": ["FileProcessed", "File", "Item"], "accession": "4DNFI1UJ5ITJ", "status": "released", "uuid": "adabd83f-ca38-46f6-a4f7-86d0462b2af2", "file_format": {"file_format": "bam", "@id": "/file-formats/bam/", "@type": ["FileFormat", "Item"], "uuid": "d13d06cf-218e-4f61-aaf0-91f226248b3c", "status": "released", "display_title": "bam", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "output_files": [{"workflow_argument_name": "annotated_bam", "value": {"accession": "4DNFIJXGHTZO", "@id": "/files-processed/4DNFIJXGHTZO/", "display_title": "4DNFIJXGHTZO.bam", "@type": ["FileProcessed", "File", "Item"], "uuid": "6d6433e7-be6b-4216-a218-88722d4689e1", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"status": "released", "display_title": "bam", "@type": ["FileFormat", "Item"], "file_format": "bam", "@id": "/file-formats/bam/", "uuid": "d13d06cf-218e-4f61-aaf0-91f226248b3c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}}, {"workflow_argument_name": "filtered_pairs", "value": {"accession": "4DNFIU7DL977", "@id": "/files-processed/4DNFIU7DL977/", "display_title": "4DNFIU7DL977.pairs.gz", "@type": ["FileProcessed", "File", "Item"], "uuid": "670423d8-0688-4389-9761-52f99ab769eb", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "file_format": {"status": "released", "display_title": "pairs", "@type": ["FileFormat", "Item"], "file_format": "pairs", "@id": "/file-formats/pairs/", "uuid": "d13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}}], "workflow": {"display_title": "Hi-C Post-alignment Processing 0.2.6 - 4DNWFT69RBY4", "@type": ["Workflow", "Item"], "uuid": "023bfb3e-9a8b-42b9-a9d4-216079526f68", "status": "released", "@id": "/workflows/4DNWFT69RBY4/", "title": "Hi-C Post-alignment Processing 0.2.6", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}], "experiment_sets": [], "pairsqc_table": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIU7DL977/4DNFIU7DL977.plot_table.out", "source_experiment_sets": [{"@type": ["ExperimentSetReplicate", "ExperimentSet", "Item"], "@id": "/experiment-set-replicates/4DNESXZHIUAU/", "status": "released", "uuid": "483d941f-bcd9-4fef-a7e0-9d3e2f1c215d", "display_title": "4DNESXZHIUAU", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}], "@context": "/terms/", "aggregated-items": {"last_modified": [{"parent": "/experiments-hi-c/4DNEX4U1GKC1/", "embedded_path": "experiments.last_modified", "item": {"date_modified": "2024-07-19T12:45:12.403796+00:00"}}, {"parent": "/files-processed/4DNFIU7DL977/", "embedded_path": "last_modified", "item": {"date_modified": "2021-04-06T20:19:01.583036+00:00"}}]}, "validation-errors": []}