FileProcessed

File4DNFIF4IKOSZ
released
View JSON

This is an output file of the Hi-C processing pipeline

   January 30th, 2020 at 8:34pm

Note(s)  

This file was produced from running the standardized Hi-C pipeline on ChIA-PET fastq files. The processing may not be optimal as the Hi-C pipeline does not take the linkers used in ChIA-PET into account.

Properties  

File Format 
pairs
File Type 
Contact List-combined
General Classification 
Processed File
(Supplementary)
File Size 
2.02 GB
  Download

More Information

Quality Metric Summary 
Filtered Reads
125.53m
Cis reads (>20kb)
18.884%
Short cis reads
75.667%
Trans Reads
5.449%
Report
pairsqc_report.html

Experiment Set

Initializing...