ExperimentSetReplicate

ExperimentSet4DNESV5WY2NW
released
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Early fraction S-phase Repliseq on MEF EMB4 - all cells were grown in a single culture and split into 2 batches prior to BrdU labeling and FACs sorting

   July 26th, 2018 at 3:56pm
Source Publication
Allele-specific control of replication timing and genome organization during development.
Rivera-Mulia JC, Dimond A, et al., Genome research 2018

Experiment Set Properties  

Set Type 
Replicate
Organism 
M. musculus
Sample Type 
primary cells
Sample 
mouse embryonic fibroblast cell
Experiment Type(s) 
2-stage Repli-seq
Modification Type 
None
Treatment Type 
None
Assay Details 
Fraction: early fraction of 2 fractions

4 Processed Files

Quality Metrics

Experiment
For File
Total Aligned
Removed Duplicates
Details
Experiment
4DNEXTLJQMDK
Bio Rep 1, Tec Rep 1
2-stage Repli-seq on mouse embryonic fibroblast cell S-phase early fraction
File
Alignments (bam)
4DNFIQE2VUJH
32.58m
2.15%
Experiment
4DNEX25JIFPV
Bio Rep 2, Tec Rep 1
2-stage Repli-seq on mouse embryonic fibroblast cell S-phase early fraction
File
Alignments (bam)
4DNFIGFBX7YY
27.32m
1.631%