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14 fewer sets in 4DN-only Data.
 

Properties

Sample Type
Sample Category
Sample
Tissue Source
Treatments
Warnings
13 Common Properties
 Project
External
 Lab
Wei Xie, TSINGHUA
 Experiment Category
Sequencing
 Experiment Type
in situ Hi-C
 Organism
Mouse
 Sample Tier
Unclassified
 Publication
Du Z et al. (2017) doi:10.1038/nature23263
 Modifications
No value
 Assay Details
Enzyme: MboI
 Center
External
 Status
Released
 Commendations
No value
 Validation Errors
No value
Title
Experiment Type
Biosample
Dataset
Condition
Assay Details
Lab
in situ Hi-C
embryo
sisHi-C of early embryos in vitro
In vitro for 45 h with alpha-amanitin (100 μg/ml)
Enzyme
MboI
in situ Hi-C
embryo
sisHi-C of early embryos in vitro
In vitro for 45 h
Enzyme
MboI
in situ Hi-C
embryo
sisHi-C of early embryos in vitro
In vitro for 20 h with alpha-amanitin (100 μg/ml)
Enzyme
MboI
in situ Hi-C
embryo
sisHi-C of early embryos in vitro
In vitro for 20 h
Enzyme
MboI
in situ Hi-C
cerebral cortex
sisHi-C during early embryonic development
Cortex
Enzyme
MboI
in situ Hi-C
R1 mESC line
sisHi-C during early embryonic development
ES cells
Enzyme
MboI
in situ Hi-C
inner cell mass
sisHi-C during early embryonic development
ICM
Enzyme
MboI
in situ Hi-C
8-cell stage embryo
sisHi-C during early embryonic development
8-cell embryos
Enzyme
MboI
in situ Hi-C
Late 2-cell stage embryo
sisHi-C during early embryonic development
Late 2-cell embryos
Enzyme
MboI
in situ Hi-C
Early 2-cell stage embryo
sisHi-C during early embryonic development
Early 2-cell embryos
Enzyme
MboI
in situ Hi-C
PN5 stage zygote
sisHi-C during early embryonic development
Zygotes in pronuclear stage 5
Enzyme
MboI
in situ Hi-C
PN3 stage zygote
sisHi-C during early embryonic development
Zygotes in pronuclear stage 3
Enzyme
MboI
in situ Hi-C
oocyte
sisHi-C during early embryonic development
Oocytes in metaphase II
Enzyme
MboI
in situ Hi-C
sperm
sisHi-C during early embryonic development
Sperm cells
Enzyme
MboI
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